6FJT
4-chloro-benzamidine in complex with thrombin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | L | Prothrombin | polymer | 28 | 3317.7 | 1 | UniProt (P00734) Pfam (PF09396) In PDB | Homo sapiens (Human) | Coagulation factor II |
2 | H | Prothrombin | polymer | 251 | 28893.3 | 1 | UniProt (P00734) Pfam (PF00089) In PDB | Homo sapiens (Human) | Coagulation factor II |
3 | I | Hirudin variant-2 | polymer | 11 | 1491.5 | 1 | Hirudo medicinalis | ||
4 | H | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
5 | H | 4-chloranylbenzenecarboximidamide | non-polymer | 154.6 | 1 | Chemie (DKQ) | |||
6 | H | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 3 | Chemie (DMS) | |||
7 | H | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
8 | H | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
9 | H | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
10 | water | water | 18.0 | 251 | Chemie (HOH) |
Sequence modifications
H: 16 - 246 (UniProt: P00734)
PDB | External Database | Details |
---|---|---|
- | Trp 511 | deletion |
- | Thr 512 | deletion |
- | Ala 513 | deletion |
- | Asn 514 | deletion |
- | Val 515 | deletion |
- | Gly 516 | deletion |
- | Lys 517 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 33702.5 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 843.2 | |
All* | Total formula weight | 34545.8 |