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6FA3

Antibody derived (Abd-6) small molecule binding to KRAS.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, D, E, F
(B, C, D, E, F)
GTPase KRaspolymer17219572.05UniProt (P01116)
Pfam (PF00071)
Homo sapiens (Human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
2B
(A)
GTPase KRaspolymer17219556.01UniProt (P01116)
Pfam (PF00071)
Homo sapiens (Human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
3G, K, M, Q, R...
(B, A, C, D, E...)
MAGNESIUM IONnon-polymer24.36Chemie (MG)
4H, L, N, P, S...
(B, A, C, D, E...)
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.26Chemie (GNP)
5I, J, O, T
(B, A, C, F)
~{N}-[[(3~{R})-5-[5-[[3-[(dimethylamino)methyl]phenyl]amino]-6-methoxy-pyridin-2-yl]-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]oxane-4-carboxamidenon-polymer532.64Chemie (D1Z)
6W
(F)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
7AA, BA, CA, X, Y...
(D, E, F, B, A...)
waterwater18.0361Chemie (HOH)
Sequence modifications
B, C, D, E, F: 1 - 168 (UniProt: P01116)
PDBExternal DatabaseDetails
Ala -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
His 61Gln 61engineered mutation
A: 1 - 168 (UniProt: P01116)
PDBExternal DatabaseDetails
Ala -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
His 61Gln 61engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight117416.2
Non-Polymers*Number of molecules17
Total formula weight5487.7
All*Total formula weight122903.8
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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