6F5K
Crystal structure of laccase from Myceliophthora thermophila
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Extracellular laccase, lcc1 | polymer | 559 | 61319.8 | 1 | UniProt (G2QG31) Pfam (PF07732) Pfam (PF00394) Pfam (PF07731) | Myceliophthora thermophila (Sporotrichum thermophile) | |
| 2 | B (B) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G10756ZZ) | |||
| 3 | C (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | D (D) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G01760ZU) | |||
| 5 | E, F (E, F) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 6 | G, H, I, J (A) | COPPER (II) ION | non-polymer | 63.5 | 4 | Chemie (CU) | |||
| 7 | K, L (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 8 | M, N (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 9 | O (A) | NONAETHYLENE GLYCOL | non-polymer | 414.5 | 1 | Chemie (2PE) | |||
| 10 | P (A) | HYDROXIDE ION | non-polymer | 17.0 | 1 | Chemie (OH) | |||
| 11 | Q (A) | water | water | 18.0 | 526 | Chemie (HOH) |
Sequence modifications
A: 1 - 559 (UniProt: G2QG31)
| PDB | External Database | Details |
|---|---|---|
| Asn 62 | - | insertion |
| Ser 63 | - | insertion |
| Ile 64 | - | insertion |
| Ile 65 | - | insertion |
| Gly 66 | Arg 109 | conflict |
| Arg 545 | His 588 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 61319.8 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 3581.3 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1208.3 | |
| All* | Total formula weight | 66109.3 |
