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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6ENU

Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1a16S ribosomal RNApolymer1539498725.41GenBank (1114277939)Escherichia coli
2b30S ribosomal protein S2polymer21824253.91UniProt (P0A7V0)
Pfam (PF00318)
In PDB		Escherichia coliSmall ribosomal subunit protein uS2
3c30S ribosomal protein S3polymer20623078.81UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Escherichia coliSmall ribosomal subunit protein uS3
4d30S ribosomal protein S4polymer20523383.01UniProt (P0A7V8)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Escherichia coliSmall ribosomal subunit protein uS4
5e30S ribosomal protein S5polymer15716532.11UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Escherichia coliSmall ribosomal subunit protein uS5
6f30S ribosomal protein S6polymer10011669.41UniProt (P02358)
Pfam (PF01250)
In PDB		Escherichia coliSmall ribosomal subunit protein bS6
7g30S ribosomal protein S7polymer15116861.51UniProt (P02359)
Pfam (PF00177)
In PDB		Escherichia coliSmall ribosomal subunit protein uS7
8h30S ribosomal protein S8polymer12914015.41UniProt (P0A7W7)
Pfam (PF00410)
In PDB		Escherichia coliSmall ribosomal subunit protein uS8
9i30S ribosomal protein S9polymer12714554.91UniProt (P0A7X3)
Pfam (PF00380)
In PDB		Escherichia coliSmall ribosomal subunit protein uS9
10j30S ribosomal protein S10polymer9811197.01UniProt (P0A7R5)
Pfam (PF00338)
In PDB		Escherichia coliSmall ribosomal subunit protein uS10
11k30S ribosomal protein S11polymer11612388.11UniProt (P0A7R9)
Pfam (PF00411)
In PDB		Escherichia coliSmall ribosomal subunit protein uS11
12l30S ribosomal protein S12polymer12313637.01UniProt (P0A7S3)
Pfam (PF00164)
In PDB		Escherichia coliSmall ribosomal subunit protein uS12
13m30S ribosomal protein S13polymer11412625.81UniProt (P0A7S9)
Pfam (PF00416)
In PDB		Escherichia coliSmall ribosomal subunit protein uS13
14n30S ribosomal protein S14polymer10111546.41UniProt (P0AG59)
Pfam (PF00253)
In PDB		Escherichia coliSmall ribosomal subunit protein uS14
15o30S ribosomal protein S15polymer8810159.61UniProt (P0ADZ4)
Pfam (PF00312)
In PDB		Escherichia coliSmall ribosomal subunit protein uS15
16p30S ribosomal protein S16polymer829207.61UniProt (P0A7T3)
Pfam (PF00886)
In PDB		Escherichia coliSmall ribosomal subunit protein bS16
17q30S ribosomal protein S17polymer809263.91UniProt (P0AG63)
Pfam (PF00366)
In PDB		Escherichia coliSmall ribosomal subunit protein uS17
18r30S ribosomal protein S18polymer657606.81UniProt (P0A7T7)
Pfam (PF01084)
In PDB		Escherichia coliSmall ribosomal subunit protein bS18
19s30S ribosomal protein S19polymer799057.61UniProt (P0A7U3)
Pfam (PF00203)
In PDB		Escherichia coliSmall ribosomal subunit protein uS19
20t30S ribosomal protein S20polymer859506.21UniProt (P0A7U7)
Pfam (PF01649)
In PDB		Escherichia coliSmall ribosomal subunit protein bS20
21u30S ribosomal protein S21polymer657763.11UniProt (P68679)
Pfam (PF01165)
In PDB		Escherichia coliSmall ribosomal subunit protein bS21
22vmRNApolymer61866.21Escherichia coli
23A23S Ribosomal RNApolymer2903941306.31GenBank (802133627)Escherichia coli
24B5S Ribosomal RNApolymer12038813.11GenBank (1213441078)Escherichia coli
25C50S ribosomal protein L2polymer27129663.21UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coliLarge ribosomal subunit protein uL2
26D50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coliLarge ribosomal subunit protein uL3
27E50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coliLarge ribosomal subunit protein uL4
28F50S ribosomal protein L5polymer17720073.21UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coliLarge ribosomal subunit protein uL5
29G50S ribosomal protein L6polymer17618801.61UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coliLarge ribosomal subunit protein uL6
30H50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Escherichia coliLarge ribosomal subunit protein bL9
31J50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coliLarge ribosomal subunit protein uL13
32K50S ribosomal protein L14polymer12213451.91UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coliLarge ribosomal subunit protein uL14
33L50S ribosomal protein L15polymer14314877.31UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coliLarge ribosomal subunit protein uL15
34M50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coliLarge ribosomal subunit protein uL16
35N50S ribosomal protein L17polymer12013721.91UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coliLarge ribosomal subunit protein bL17
36O50S ribosomal protein L18polymer11612663.51UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliLarge ribosomal subunit protein uL18
37P50S ribosomal protein L19polymer11413028.11UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliLarge ribosomal subunit protein bL19
38Q50S ribosomal protein L20polymer11713396.81UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliLarge ribosomal subunit protein bL20
39R50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliLarge ribosomal subunit protein bL21
40S50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliLarge ribosomal subunit protein uL22
41T50S ribosomal protein L23polymer9310546.51UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliLarge ribosomal subunit protein uL23
42U50S ribosomal protein L24polymer10211078.91UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coliLarge ribosomal subunit protein uL24
43V50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliLarge ribosomal subunit protein bL25
44W50S ribosomal protein L27polymer788419.61UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliLarge ribosomal subunit protein bL27
45X50S ribosomal protein L28polymer778896.41UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliLarge ribosomal subunit protein bL28
46Y50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliLarge ribosomal subunit protein uL29
47Z50S ribosomal protein L30polymer586423.61UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliLarge ribosomal subunit protein uL30
48050S ribosomal protein L32polymer566332.21UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coliLarge ribosomal subunit protein bL32
49150S ribosomal protein L33polymer505814.81UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliLarge ribosomal subunit protein bL33
50250S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliLarge ribosomal subunit protein bL34
51350S ribosomal protein L35polymer647181.81UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliLarge ribosomal subunit protein bL35,Ribosomal protein A
52450S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliLarge ribosomal subunit protein bL36-A,Ribosomal protein B
53650S ribosomal protein L31polymer667516.71UniProt (P0A7M9)
Pfam (PF01197)
In PDB		Escherichia coliLarge ribosomal subunit protein bL31-A
54xProline tRNApolymer7724846.71GenBank (1231762938)Escherichia coli
55750S ribosomal protein L1polymer22423761.51UniProt (P0A7L0)
Pfam (PF00687)
In PDB		Escherichia coliLarge ribosomal subunit protein uL1
56wElongation factor Ppolymer18820755.41UniProt (P0A6N4)
Pfam (PF08207)
Pfam (PF01132)
Pfam (PF09285)
In PDB		Escherichia coliEF-P
57A, xPROLINEnon-polymer115.12Chemie (PRO)
Sequence modifications
n: 1 - 101 (UniProt: P0AG59)
PDBExternal DatabaseDetails
Ala 35-insertion
A: 1 - 2903 (GenBank: 802133627)
PDBExternal DatabaseDetails
C 747U 2724742conflict
G 1847A 2723642conflict
A 2069G 2723420conflict
U 2104C 2723385conflict
B: 1 - 120 (GenBank: 1213441078)
PDBExternal DatabaseDetails
A 120U 4143480conflict
w: 1 - 188 (UniProt: P0A6N4)
PDBExternal DatabaseDetails
Keo 34Lys 34engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2183436.2
Non-Polymers*Number of molecules2
Total formula weight230.3
All*Total formula weight2183666.5
*Water molecules are not included.

218853

PDB entries from 2024-04-24

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