6EGU
Structure of RVFV envelope protein Gc in postfusion conformation in complex with 1,2-dipropionyl-sn-glycero-3-phosphocholine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | RVFV ENVELOPE PROTEIN GC | polymer | 531 | 57244.5 | 3 | UniProt (A2T087) Pfam (PF07245) Pfam (PF19019) UniProt (by SIFTS) (P03518) | Rift Valley fever virus | |
| 2 | D, E (D, E) | beta-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 2 | In PDB GlyTouCan (G61843VN) | |||
| 3 | F, G, I, J, L... (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 4 | H, K, N (A, B, C) | [(2R)-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-2-propanoyloxy-propyl] propanoate | non-polymer | 370.4 | 3 | Chemie (43Y) | |||
| 5 | O, P, Q (A, B, C) | water | water | 18.0 | 992 | Chemie (HOH) |
Sequence modifications
A, B, C: 691 - 1158 (UniProt: A2T087)
| PDB | External Database | Details |
|---|---|---|
| His 821 | Trp 821 | engineered mutation |
| Asp 1159 | - | expression tag |
| Pro 1160 | - | expression tag |
| Thr 1161 | - | expression tag |
| Gly 1162 | - | expression tag |
| Asp 1163 | - | expression tag |
| Tyr 1164 | - | expression tag |
| Lys 1165 | - | expression tag |
| Asp 1166 | - | expression tag |
| Asp 1167 | - | expression tag |
| Asp 1168 | - | expression tag |
| Asp 1169 | - | expression tag |
| Ala 1170 | - | expression tag |
| Gly 1171 | - | expression tag |
| Pro 1172 | - | expression tag |
| Gly 1173 | - | expression tag |
| Trp 1174 | - | expression tag |
| Ser 1175 | - | expression tag |
| His 1176 | - | expression tag |
| Pro 1177 | - | expression tag |
| Gln 1178 | - | expression tag |
| Phe 1179 | - | expression tag |
| Glu 1180 | - | expression tag |
| Lys 1181 | - | expression tag |
| Gly 1182 | - | expression tag |
| Gly 1183 | - | expression tag |
| Gly 1184 | - | expression tag |
| Ser 1185 | - | expression tag |
| Gly 1186 | - | expression tag |
| Gly 1187 | - | expression tag |
| Gly 1188 | - | expression tag |
| Ser 1189 | - | expression tag |
| Gly 1190 | - | expression tag |
| Gly 1191 | - | expression tag |
| Gly 1192 | - | expression tag |
| Ser 1193 | - | expression tag |
| Trp 1194 | - | expression tag |
| Ser 1195 | - | expression tag |
| His 1196 | - | expression tag |
| Pro 1197 | - | expression tag |
| Gln 1198 | - | expression tag |
| Phe 1199 | - | expression tag |
| Glu 1200 | - | expression tag |
| Lys 1201 | - | expression tag |
| Gly 1202 | - | expression tag |
| Gly 1203 | - | expression tag |
| Gly 1204 | - | expression tag |
| Ser 1205 | - | expression tag |
| Gly 1206 | - | expression tag |
| Gly 1207 | - | expression tag |
| Gly 1208 | - | expression tag |
| Ser 1209 | - | expression tag |
| Gly 1210 | - | expression tag |
| Gly 1211 | - | expression tag |
| Gly 1212 | - | expression tag |
| Ser 1213 | - | expression tag |
| Trp 1214 | - | expression tag |
| Ser 1215 | - | expression tag |
| His 1216 | - | expression tag |
| Pro 1217 | - | expression tag |
| Gln 1218 | - | expression tag |
| Phe 1219 | - | expression tag |
| Glu 1220 | - | expression tag |
| Lys 1221 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 171733.4 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 734.7 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 2438.3 | |
| All* | Total formula weight | 174906.4 |
