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6EDT

Mycobacterium tuberculosis RNAP open promoter complex with RbpA/CarD and AP3 promoter

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA-directed RNA polymerase subunit alphapolymer34737745.32UniProt (A5U8D3)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
UniProt (by SIFTS) (P9WGZ1)
Mycobacterium tuberculosisRNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha
2C
(C)
DNA-directed RNA polymerase subunit betapolymer1134125390.91UniProt (V9Z879)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Pfam (PF04560)
UniProt (by SIFTS) (P9WGY9)
Mycobacterium tuberculosisRNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta
3D
(D)
DNA-directed RNA polymerase subunit beta'polymer1371152882.11UniProt (A5U053)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
UniProt (by SIFTS) (P9WGY7)
Mycobacterium tuberculosisRNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta'
4E
(E)
DNA-directed RNA polymerase subunit omegapolymer11011777.01UniProt (A0A0T9N9K3)
Pfam (PF01192)
UniProt (by SIFTS) (P9WGY5)
Mycobacterium tuberculosisRNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega
5F
(F)
RNA polymerase sigma factor SigApolymer53158169.51UniProt (P9WGI0)
Pfam (PF00140)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
UniProt (by SIFTS) (P9WGI1)
Mycobacterium tuberculosisSigma-A
6G
(J)
RNA polymerase-binding protein RbpApolymer11112993.71UniProt (P9WHJ4)
Pfam (PF13397)
UniProt (by SIFTS) (P9WHJ5)
Mycobacterium tuberculosis
7H
(O)
DNA (65-MER)polymer9027907.81Mycobacterium tuberculosis
8I
(P)
DNA (65-MER)polymer9027618.61Mycobacterium tuberculosis
9J
(M)
RNA polymerase-binding transcription factor CarDpolymer16217933.41UniProt (P9WJG2)
Pfam (PF02559)
Pfam (PF21095)
UniProt (by SIFTS) (P9WJG3)
Mycobacterium tuberculosis
10K, L
(D)
ZINC IONnon-polymer65.42Chemie (ZN)
11M
(D)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
Sequence modifications
D: 1 - 1316 (UniProt: A5U053)
PDBExternal DatabaseDetails
Asp -46-expression tag
Gly -45-expression tag
Ala -44-expression tag
Ala -43-expression tag
Ile -42-expression tag
Glu -41-expression tag
Leu -40-expression tag
Arg -39-expression tag
Glu -38-expression tag
Gly -37-expression tag
Glu -36-expression tag
Asp -35-expression tag
Glu -34-expression tag
Asp -33-expression tag
Leu -32-expression tag
Glu -31-expression tag
Arg -30-expression tag
Ala -29-expression tag
Ala -28-expression tag
Ala -27-expression tag
Asn -26-expression tag
Leu -25-expression tag
Gly -24-expression tag
Ile -23-expression tag
Asn -22-expression tag
Leu -21-expression tag
Ser -20-expression tag
Arg -19-expression tag
Asn -18-expression tag
Glu -17-expression tag
Ser -16-expression tag
Ala -15-expression tag
Ser -14-expression tag
Val -13-expression tag
Glu -12-expression tag
Asp -11-expression tag
Leu -10-expression tag
Ala -9-expression tag
Leu -8-expression tag
Ala -7-expression tag
Arg -6-expression tag
His -5-expression tag
Gly -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
Gly -1-expression tag
Ala 0-expression tag
His 1317-expression tag
His 1318-expression tag
His 1319-expression tag
His 1320-expression tag
His 1321-expression tag
His 1322-expression tag
His 1323-expression tag
His 1324-expression tag
E: 2 - 110 (UniProt: A0A0T9N9K3)
PDBExternal DatabaseDetails
Gly 1-expression tag
F: 1 - 528 (UniProt: P9WGI0)
PDBExternal DatabaseDetails
Gly -2-expression tag
Pro -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight510163.6
Non-Polymers*Number of molecules3
Total formula weight155.1
All*Total formula weight510318.7
*Water molecules are not included.

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PDB entries from 2025-04-30

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