6E6B
Crystal structure of the Protocadherin GammaB4 extracellular domain
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Protocadherin gamma B4 | polymer | 646 | 70991.8 | 2 | UniProt (Q91XX6) Pfam (PF08266) Pfam (PF00028) In PDB | Mus musculus (Mouse) | Protocadherin gamma subfamily B,4 |
2 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
3 | D | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB GlyTouCan (G82348BZ) | |||
4 | E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
5 | B, A | CALCIUM ION | non-polymer | 40.1 | 30 | Chemie (CA) | |||
6 | B, A | alpha-D-mannopyranose | non-polymer | 180.2 | 4 | Chemie (MAN) | |||
7 | B, A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A, B: 1 - 638 (UniProt: Q91XX6)
PDB | External Database | Details |
---|---|---|
His 639 | - | expression tag |
His 640 | - | expression tag |
His 641 | - | expression tag |
His 642 | - | expression tag |
His 643 | - | expression tag |
His 644 | - | expression tag |
His 645 | - | expression tag |
His 646 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 141983.6 | |
Branched | Number of molecules | 3 |
Total formula weight | 2051.9 | |
Non-Polymers* | Number of molecules | 37 |
Total formula weight | 2586.6 | |
All* | Total formula weight | 146622.1 |