6DPF
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 40 mM Mn2+ and 200 mM K+ for 40 s at 21 C
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ribonuclease H | polymer | 136 | 15716.7 | 1 | UniProt (Q9KEI9) | Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) | RNase H |
| 2 | B (B) | RNA (5'-R(*AP*CP*AP*U)-3') portion of cleaved RNA | polymer | 4 | 1224.8 | 1 | synthetic | ||
| 3 | C (b) | RNA (5'-R(P*CP*G)-3') portion of cleaved RNA | polymer | 2 | 605.4 | 1 | synthetic | ||
| 4 | D (C) | DNA (5'-D(*CP*GP*AP*TP*GP*T)-3') | polymer | 6 | 1824.2 | 1 | synthetic | ||
| 5 | E, F, G, H, V (A, b) | MANGANESE (II) ION | non-polymer | 54.9 | 5 | Chemie (MN) | |||
| 6 | I, J, K, L, W (A, b) | IODIDE ION | non-polymer | 126.9 | 5 | Chemie (IOD) | |||
| 7 | M, N, P (A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 8 | O, Q, R, S (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 9 | T (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 10 | U (A) | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 11 | AA, X, Y, Z (C, A, B, b) | water | water | 18.0 | 167 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 19371.2 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 1623.0 | |
| All* | Total formula weight | 20994.2 |
