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6DDG

Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-6

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A50S ribosomal protein L19polymer11613392.81UniProt (A0A077UVB6)
Pfam (PF01245)
UniProt (by SIFTS) (Q2FZ42)
In PDB
Staphylococcus aureus
2B50S ribosomal protein L2polymer27630088.01UniProt (B3VKN3)
Pfam (PF00181)
Pfam (PF03947)
UniProt (by SIFTS) (P60430)
In PDB
Staphylococcus aureus
3C50S ribosomal protein L20polymer11813720.31UniProt (A0A077VMP6)
Pfam (PF00453)
UniProt (by SIFTS) (Q2FXQ1)
In PDB
Staphylococcus aureus
4D50S ribosomal protein L21polymer10211354.11UniProt (D7URR3)
Pfam (PF00829)
UniProt (by SIFTS) (Q2FXS8)
In PDB
Staphylococcus aureus
5E50S ribosomal protein L22polymer11612786.81UniProt (A0A077UKF9)
Pfam (PF00237)
UniProt (by SIFTS) (Q2FW11)
In PDB
Staphylococcus aureus
6F50S ribosomal protein L23polymer9110625.41UniProt (W8TUB4)
Pfam (PF00276)
UniProt (by SIFTS) (Q2FW08)
In PDB
Staphylococcus aureus
7G50S ribosomal protein L24polymer10511561.51UniProt (W8TRD5)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (Q2FW17)
In PDB
Staphylococcus aureus
8H50S ribosomal protein L25polymer21723810.61UniProt (A0A133Q8Z9)
Pfam (PF01386)
Pfam (PF14693)
UniProt (by SIFTS) (Q2FJE0)
In PDB
Staphylococcus aureusGeneral stress protein CTC
9I50S ribosomal protein L27polymer859198.41UniProt (A0A077ULC5)
Pfam (PF01016)
UniProt (by SIFTS) (Q2FXT0)
In PDB
Staphylococcus aureus
10J50S ribosomal protein L28polymer626995.31UniProt (A0A077URJ8)
Pfam (PF00830)
UniProt (by SIFTS) (Q2FZ60)
In PDB
Staphylococcus aureus
11K50S ribosomal protein L29polymer698105.31UniProt (A0A077W1J5)
Pfam (PF00831)
UniProt (by SIFTS) (Q2FW14)
In PDB
Staphylococcus aureus
12L50S ribosomal protein L3polymer21723459.91UniProt (W8U3W0)
Pfam (PF00297)
UniProt (by SIFTS) (Q2FW06)
In PDB
Staphylococcus aureus
13M50S ribosomal protein L30polymer596565.71UniProt (W8UVN7)
Pfam (PF00327)
UniProt (by SIFTS) (P0A0G2)
In PDB
Staphylococcus aureus
14N50S ribosomal protein L32polymer576500.61UniProt (A0A077UWR7)
Pfam (PF01783)
UniProt (by SIFTS) (Q2FZF1)
In PDB
Staphylococcus aureus
15O50S ribosomal protein L33polymer495885.81UniProt (A0A077UXT4)
Pfam (PF00471)
UniProt (by SIFTS) (Q2FY22)
In PDB
Staphylococcus aureus
16P50S ribosomal protein L34polymer455454.61UniProt (Q2YZB6)
Pfam (PF00468)
UniProt (by SIFTS) (Q2FUQ0)
In PDB
Staphylococcus aureus
17Q50S ribosomal protein L35polymer657593.21UniProt (A0A077UL47)
Pfam (PF01632)
UniProt (by SIFTS) (Q2FXQ0)
In PDB
Staphylococcus aureus
18R50S ribosomal protein L36polymer374318.41UniProt (A0A077UGV8)
Pfam (PF00444)
UniProt (by SIFTS) (Q2FW29)
In PDB
Staphylococcus aureus
19S50S ribosomal protein L4polymer20722523.81UniProt (A0A166DK89)
Pfam (PF00573)
UniProt (by SIFTS) (Q2FW07)
In PDB
Staphylococcus aureus
20V50S ribosomal protein L13polymer14516359.41UniProt (W8TUE6)
Pfam (PF00572)
UniProt (by SIFTS) (Q2FW38)
In PDB
Staphylococcus aureus
21W50S ribosomal protein L14polymer12213157.31UniProt (A0A077UUA0)
Pfam (PF00238)
UniProt (by SIFTS) (Q2FW16)
In PDB
Staphylococcus aureus
22X50S ribosomal protein L15polymer14615628.91UniProt (A0A077UGA7)
Pfam (PF00828)
UniProt (by SIFTS) (P0A0F8)
In PDB
Staphylococcus aureus
23Y50S ribosomal protein L16polymer14416274.01UniProt (A0A077V4G0)
Pfam (PF00252)
UniProt (by SIFTS) (Q2FW13)
In PDB
Staphylococcus aureus
24Z50S ribosomal protein L17polymer12213771.81UniProt (A0A077UG91)
Pfam (PF01196)
UniProt (by SIFTS) (Q2FW33)
In PDB
Staphylococcus aureus
25a50S ribosomal protein L18polymer11913124.11UniProt (W8TRE0)
Pfam (PF00861)
UniProt (by SIFTS) (Q2FW22)
In PDB
Staphylococcus aureus
26123S rRNApolymer2923946696.61GenBank (1269117575)Staphylococcus aureus
2725S rRNApolymer11536974.91GenBank (1333434557)Staphylococcus aureus
2812-chloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamidenon-polymer371.81Chemie (G6M)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains27
Total formula weight1305927.6
Non-Polymers*Number of molecules1
Total formula weight371.8
All*Total formula weight1306299.3
*Water molecules are not included.

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PDB entries from 2024-03-27

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