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6DB8

Structural basis for promiscuous binding and activation of fluorogenic dyes by DIR2s RNA aptamer

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(H)
Fab-Heavy chainpolymer23224665.51synthetic construct
2B
(R)
RNA (60-MER)polymer6019380.61synthetic construct
3C
(L)
Fab-Light chainpolymer21223075.61synthetic construct
4D
(R)
2-[(Z)-(3-methyl-1,3-benzoxazol-2(3H)-ylidene)methyl]-3-(3-sulfopropyl)-1,3-benzothiazol-3-iumnon-polymer403.51Chemie (G4A)
5E, F, G
(H, R, L)
waterwater18.0252Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight67121.7
Non-Polymers*Number of molecules1
Total formula weight403.5
All*Total formula weight67525.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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