6CVB
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | viral protein 1 | polymer | 297 | 32957.4 | 1 | UniProt (A0A0X7Z9B1) Pfam (PF22663) | Enterovirus D68 | |
| 2 | B (B) | viral protein 3 | polymer | 247 | 27170.9 | 1 | UniProt (E9RIT6) Pfam (PF00073) | Enterovirus D68 | |
| 3 | C (C) | viral protein 2 | polymer | 248 | 27595.2 | 1 | UniProt (A0A097ZN88) Pfam (PF00073) UniProt (by SIFTS) (A0A0X7Z9B1) | Enterovirus D68 | |
| 4 | D (D) | viral protein 4 | polymer | 68 | 7337.0 | 1 | UniProt (A0A0P0DH17) Pfam (PF02226) | Enterovirus D68 | |
| 5 | E (E) | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 674.6 | 1 | In PDB BIRD (PRD_900046) GlyTouCan (G73578JC) | 6'-sialyl-N-acetyllactosamine | ||
| 6 | F, G, H, I (A, B, C, D) | water | water | 18.0 | 337 | Chemie (HOH) |
Sequence modifications
C: 1 - 248 (UniProt: A0A097ZN88)
| PDB | External Database | Details |
|---|---|---|
| Arg 116 | Lys 116 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 95060.5 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 674.6 | |
| All* | Total formula weight | 95735.1 |
