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6CM2

SAMHD1 HD domain bound to decitabine triphosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(D, C, B, A)
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1polymer51459604.24UniProt (Q9Y3Z3)
Pfam (PF01966)
Homo sapiens (Human)dNTPase,Dendritic cell-derived IFNG-induced protein,DCIP,Monocyte protein 5,MOP-5,SAM domain and HD domain-containing protein 1
2E, G, H, J, L...
(D, C, B, A)
6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-onenon-polymer470.28Chemie (F6G)
3F, N, P, T
(D, B, A)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.24Chemie (GTP)
4I, K, M, R
(C, B, A)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
5U, V, W, X
(D, C, B, A)
waterwater18.0368Chemie (HOH)
Sequence modifications
D, C, B, A: 113 - 626 (UniProt: Q9Y3Z3)
PDBExternal DatabaseDetails
Arg 206His 206engineered mutation
Asn 207Asp 207engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight238416.7
Non-Polymers*Number of molecules16
Total formula weight5951.2
All*Total formula weight244367.9
*Water molecules are not included.

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PDB entries from 2025-12-24

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