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6CF5

Crystal structure of the A/Viet Nam/1203/2004(H5N1) influenza virus hemagglutinin in complex with small molecule N-Cyclohexyltaurine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E
(A, C, E)
Hemagglutininpolymer33437948.03UniProt (Q5EP31)
Pfam (PF00509)
UniProt (by SIFTS) (Q6DQ33)
Influenza A virus (A/Viet Nam/1203/2004(H5N1))
2B, D, F
(B, D, F)
Hemagglutininpolymer17720414.53UniProt (Q6DQ18)
Pfam (PF00509)
UniProt (by SIFTS) (A8UDR1)
Influenza A virus (A/Viet Nam/1203/2004(H5N1))
3G, H, I
(G, H, I)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
4J, R, Y
(A, C, E)
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACIDnon-polymer207.33Chemie (NHE)
5K, S, T
(A, C)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
6L, M, N, P, Q...
(A, B, C, D, E)
DI(HYDROXYETHYL)ETHERnon-polymer106.19Chemie (PEG)
7AA, BA, O, V
(E, A, C)
GLYCEROLnon-polymer92.14Chemie (GOL)
8CA, DA, EA, FA, GA...
(A, B, C, D, E...)
waterwater18.01328Chemie (HOH)
Sequence modifications
A, C, E: 11 - 333 (UniProt: Q5EP31)
PDBExternal DatabaseDetails
Ala 7-expression tag
Asp 8-expression tag
Pro 9-expression tag
Gly 10-expression tag
B, D, F: 1 - 174 (UniProt: Q6DQ18)
PDBExternal DatabaseDetails
Ser 175-expression tag
Gly 176-expression tag
Arg 177-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight175087.6
BranchedNumber of molecules3
Total formula weight1273.2
Non-Polymers*Number of molecules19
Total formula weight2608.9
All*Total formula weight178969.7
*Water molecules are not included.

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PDB entries from 2025-06-25

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