6CF5
Crystal structure of the A/Viet Nam/1203/2004(H5N1) influenza virus hemagglutinin in complex with small molecule N-Cyclohexyltaurine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Hemagglutinin | polymer | 334 | 37948.0 | 3 | UniProt (Q5EP31) Pfam (PF00509) UniProt (by SIFTS) (Q6DQ33) In PDB | Influenza A virus (A/Viet Nam/1203/2004(H5N1)) | |
2 | B, D, F | Hemagglutinin | polymer | 177 | 20414.5 | 3 | UniProt (Q6DQ18) Pfam (PF00509) UniProt (by SIFTS) (A8UDR1) In PDB | Influenza A virus (A/Viet Nam/1203/2004(H5N1)) | |
3 | G, H, I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
4 | A, C, E | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | non-polymer | 207.3 | 3 | Chemie (NHE) | |||
5 | A, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
6 | A, B, C, D, E | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 9 | Chemie (PEG) | |||
7 | E, A, C | GLYCEROL | non-polymer | 92.1 | 4 | Chemie (GOL) | |||
8 | water | water | 18.0 | 1328 | Chemie (HOH) |
Sequence modifications
A, C, E: 11 - 333 (UniProt: Q5EP31)
B, D, F: 1 - 174 (UniProt: Q6DQ18)
PDB | External Database | Details |
---|---|---|
Ala 7 | - | expression tag |
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Gly 10 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 175 | - | expression tag |
Gly 176 | - | expression tag |
Arg 177 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 175087.6 | |
Branched | Number of molecules | 3 |
Total formula weight | 1273.2 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 2608.9 | |
All* | Total formula weight | 178969.7 |