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6BY1

E. coli pH03H9 complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, FB
(AA, BA)
16S ribosomal RNApolymer1541499360.82GenBank (1126835768)Escherichia coli (strain K12)
2B, GB
(CA, DA)
23S ribosomal RNApolymer2904941612.42GenBank (687670942)Escherichia coli (strain K12)
3C, HB
(CB, DB)
5S ribosomal RNApolymer11838177.82GenBank (1266940032)Escherichia coli (strain K12)
4D, E, IB, LA, OC
(AV, AY, AW, BV, BW)
Valine-specific transfer RNApolymer7624483.65GenBank (1275521620)Escherichia coli (strain K12)
5F, JB
(CC, DC)
50S ribosomal protein L2polymer27129663.22UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
Escherichia coli (strain K12)Large ribosomal subunit protein uL2
6G, KB
(CD, DD)
50S ribosomal protein L3polymer20922277.52UniProt (P60438)
Pfam (PF00297)
Escherichia coli (strain K12)Large ribosomal subunit protein uL3
7H, LB
(CE, DE)
50S ribosomal protein L4polymer18119998.22UniProt (P60723)
Pfam (PF00573)
Escherichia coli (strain K12)Large ribosomal subunit protein uL4
8I, MB
(CF, DF)
50S ribosomal protein L5polymer17720073.22UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
Escherichia coli (strain K12)Large ribosomal subunit protein uL5
9J, NB
(CG, DG)
50S ribosomal protein L6polymer17618801.62UniProt (P0AG55)
Pfam (PF00347)
Escherichia coli (strain K12)Large ribosomal subunit protein uL6
10K, OB
(CH, DH)
50S ribosomal protein L9polymer14915789.02UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
Escherichia coli (strain K12)Large ribosomal subunit protein bL9
11L
(C5)
50S ribosomal protein L10polymer10911784.71UniProt (P0A7J3)
Pfam (PF00466)
Escherichia coli (strain K12)50S ribosomal protein L8,Large ribosomal subunit protein uL10
12M, PB
(CI, DI)
50S ribosomal protein L11polymer727450.62UniProt (P0A7J7)
Pfam (PF00298)
Escherichia coli (strain K12)Large ribosomal subunit protein uL11
13N, QB
(CJ, DJ)
50S ribosomal protein L13polymer14216050.62UniProt (P0AA10)
Pfam (PF00572)
Escherichia coli (strain K12)Large ribosomal subunit protein uL13
14O, RB
(CK, DK)
50S ribosomal protein L14polymer12213451.92UniProt (P0ADY3)
Pfam (PF00238)
Escherichia coli (strain K12)Large ribosomal subunit protein uL14
15P, SB
(CL, DL)
50S ribosomal protein L15polymer14314877.32UniProt (P02413)
Pfam (PF00828)
Escherichia coli (strain K12)Large ribosomal subunit protein uL15
16Q, TB
(CM, DM)
50S ribosomal protein L16polymer13615312.32UniProt (P0ADY7)
Pfam (PF00252)
Escherichia coli (strain K12)Large ribosomal subunit protein uL16
17R, UB
(CN, DN)
50S ribosomal protein L17polymer12113851.12UniProt (P0AG44)
Pfam (PF01196)
Escherichia coli (strain K12)Large ribosomal subunit protein bL17
18S, VB
(CO, DO)
50S ribosomal protein L18polymer11612663.52UniProt (P0C018)
Pfam (PF00861)
Escherichia coli (strain K12)Large ribosomal subunit protein uL18
19T, WB
(CP, DP)
50S ribosomal protein L19polymer11413028.12UniProt (P0A7K6)
Pfam (PF01245)
Escherichia coli (strain K12)Large ribosomal subunit protein bL19
20U, XB
(CQ, DQ)
50S ribosomal protein L20polymer11713396.82UniProt (P0A7L3)
Pfam (PF00453)
Escherichia coli (strain K12)Large ribosomal subunit protein bL20
21V, YB
(CR, DR)
50S ribosomal protein L21polymer10311586.42UniProt (P0AG48)
Pfam (PF00829)
Escherichia coli (strain K12)Large ribosomal subunit protein bL21
22W, ZB
(CS, DS)
50S ribosomal protein L22polymer11012253.42UniProt (P61175)
Pfam (PF00237)
Escherichia coli (strain K12)Large ribosomal subunit protein uL22
23AC, X
(CT, DT)
50S ribosomal protein L23polymer9310546.52UniProt (P0ADZ0)
Pfam (PF00276)
Escherichia coli (strain K12)Large ribosomal subunit protein uL23
24BC, Y
(CU, DU)
50S ribosomal protein L24polymer10211078.92UniProt (P60625)
Pfam (PF00467)
Pfam (PF17136)
UniProt (by SIFTS) (P60624)
Escherichia coli (strain K12)
25CC, Z
(CV, DV)
50S ribosomal protein L25polymer9410713.52UniProt (P68919)
Pfam (PF01386)
Escherichia coli (strain K12)Large ribosomal subunit protein bL25
26AA, DC
(CW, DW)
50S ribosomal protein L27polymer758174.42UniProt (P0A7L8)
Pfam (PF01016)
Escherichia coli (strain K12)Large ribosomal subunit protein bL27
27BA, EC
(CX, DX)
50S ribosomal protein L28polymer778896.42UniProt (P0A7M2)
Pfam (PF00830)
Escherichia coli (strain K12)Large ribosomal subunit protein bL28
28CA, FC
(CY, DY)
50S ribosomal protein L29polymer637286.52UniProt (P0A7M6)
Pfam (PF00831)
Escherichia coli (strain K12)Large ribosomal subunit protein uL29
29DA, GC
(CZ, DZ)
50S ribosomal protein L30polymer586423.62UniProt (P0AG51)
Pfam (PF00327)
Escherichia coli (strain K12)Large ribosomal subunit protein uL30
30EA, HC
(C0, D0)
50S ribosomal protein L31polymer394262.92UniProt (P0A7M9)
Pfam (PF01197)
Escherichia coli (strain K12)Large ribosomal subunit protein bL31-A
31FA, IC
(C1, D1)
50S ribosomal protein L32polymer566332.22UniProt (P0A7N4)
Pfam (PF01783)
Escherichia coli (strain K12)Large ribosomal subunit protein bL32
32GA, JC
(C2, D2)
50S ribosomal protein L33polymer505814.82UniProt (P0A7N9)
Pfam (PF00471)
Escherichia coli (strain K12)Large ribosomal subunit protein bL33
33HA, KC
(C3, D3)
50S ribosomal protein L34polymer465397.52UniProt (P0A7P5)
Pfam (PF00468)
Escherichia coli (strain K12)Large ribosomal subunit protein bL34
34IA, LC
(C4, D4)
50S ribosomal protein L35polymer626947.62UniProt (P0A7Q1)
Pfam (PF01632)
Escherichia coli (strain K12)Large ribosomal subunit protein bL35,Ribosomal protein A
35JA, MC
(C6, D6)
50S ribosomal protein L36polymer384377.42UniProt (P0A7Q6)
Pfam (PF00444)
Escherichia coli (strain K12)Large ribosomal subunit protein bL36-A,Ribosomal protein B
36KA, NC
(AX, BX)
Messenger RNApolymer4614995.02Escherichia coli
37MA, PC
(AB, BB)
30S ribosomal protein S2polymer22525015.82UniProt (P0A7V0)
Pfam (PF00318)
Escherichia coli (strain K12)Small ribosomal subunit protein uS2
38NA, QC
(AC, BC)
30S ribosomal protein S3polymer20623078.82UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
Escherichia coli (strain K12)Small ribosomal subunit protein uS3
39OA, RC
(AD, BD)
30S ribosomal protein S4polymer20523383.02UniProt (P0A7V8)
Pfam (PF00163)
Pfam (PF01479)
Escherichia coli (strain K12)Small ribosomal subunit protein uS4
40PA, SC
(AE, BE)
30S ribosomal protein S5polymer15015804.32UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
Escherichia coli (strain K12)Small ribosomal subunit protein uS5
41QA, TC
(AF, BF)
30S ribosomal protein S6polymer10011669.42UniProt (P02358)
Pfam (PF01250)
Escherichia coli (strain K12)Small ribosomal subunit protein bS6
42RA, UC
(AG, BG)
30S ribosomal protein S7polymer17920055.22UniProt (P02359)
Pfam (PF00177)
Escherichia coli (strain K12)Small ribosomal subunit protein uS7
43SA, VC
(AH, BH)
30S ribosomal protein S8polymer12914015.42UniProt (P0A7W7)
Pfam (PF00410)
Escherichia coli (strain K12)Small ribosomal subunit protein uS8
44TA, WC
(AI, BI)
30S ribosomal protein S9polymer13014886.32UniProt (P0A7X3)
Pfam (PF00380)
Escherichia coli (strain K12)Small ribosomal subunit protein uS9
45UA, XC
(AJ, BJ)
30S ribosomal protein S10polymer9811197.02UniProt (P0A7R5)
Pfam (PF00338)
Escherichia coli (strain K12)Small ribosomal subunit protein uS10
46VA, YC
(AK, BK)
30S ribosomal protein S11polymer11712487.22UniProt (P0A7R9)
Pfam (PF00411)
Escherichia coli (strain K12)Small ribosomal subunit protein uS11
47WA, ZC
(AL, BL)
30S ribosomal protein S12polymer12313637.02UniProt (P0A7S3)
Pfam (PF00164)
Escherichia coli (strain K12)Small ribosomal subunit protein uS12
48AD, XA
(AM, BM)
30S ribosomal protein S13polymer11412625.82UniProt (P0A7S9)
Pfam (PF00416)
Escherichia coli (strain K12)Small ribosomal subunit protein uS13
49BD, YA
(AN, BN)
30S ribosomal protein S14polymer10111606.62UniProt (P0AG59)
Pfam (PF00253)
Escherichia coli (strain K12)Small ribosomal subunit protein uS14
50CD, ZA
(AO, BO)
30S ribosomal protein S15polymer8910290.82UniProt (P0ADZ4)
Pfam (PF00312)
Escherichia coli (strain K12)Small ribosomal subunit protein uS15
51AB, DD
(AP, BP)
30S ribosomal protein S16polymer829207.62UniProt (P0A7T3)
Pfam (PF00886)
Escherichia coli (strain K12)Small ribosomal subunit protein bS16
52BB, ED
(AQ, BQ)
30S ribosomal protein S17polymer809263.92UniProt (P0AG63)
Pfam (PF00366)
Escherichia coli (strain K12)Small ribosomal subunit protein uS17
53CB, FD
(AR, BR)
30S ribosomal protein S18polymer556466.52UniProt (P0A7T7)
Pfam (PF01084)
Escherichia coli (strain K12)Small ribosomal subunit protein bS18
54DB, GD
(AS, BS)
30S ribosomal protein S19polymer799057.62UniProt (P0A7U3)
Pfam (PF00203)
Escherichia coli (strain K12)Small ribosomal subunit protein uS19
55EB, HD
(AT, BT)
30S ribosomal protein S20polymer859506.22UniProt (P0A7U7)
Pfam (PF01649)
Escherichia coli (strain K12)Small ribosomal subunit protein bS20
56AE, AF, AG, AH, AI...
(AA, CA, BA, DA, DB...)
MAGNESIUM IONnon-polymer24.3445Chemie (MG)
57AM, NU, OU, YL
(C6, D0, D6, C0)
ZINC IONnon-polymer65.44Chemie (ZN)
58AV, AW, AX, AY, BV...
(C5, AB, DF, BW, CI...)
waterwater18.03916Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains112
Total formula weight4382556.2
Non-Polymers*Number of molecules449
Total formula weight11077.4
All*Total formula weight4393633.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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