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6BL0

Novel Modes of Inhibition of Wild-Type IDH1:Direct Covalent Modification of His315 with Cmpd11

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Isocitrate dehydrogenase [NADP] cytoplasmicpolymer42548154.73UniProt (O75874)
Pfam (PF00180)
Homo sapiens (Human)IDH,Cytosolic NADP-isocitrate dehydrogenase,IDP,NADP(+)-specific ICDH,Oxalosuccinate decarboxylase
2D, F, J
(A, C)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
3E, H, K
(A, C)
ISOCITRIC ACIDnon-polymer192.13Chemie (ICT)
4G
(A)
(5aS,6S,8S,9aS)-2-(benzenecarbonyl)-6-methyl-7-oxo-9a-phenyl-4,5,5a,6,7,8,9,9a-octahydro-2H-benzo[g]indazole-8-carbonitrilenon-polymer409.51Chemie (DWJ)
5I, L
(B, C)
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATEnon-polymer743.42Chemie (NAP)
6M, N, O
(A, B, C)
waterwater18.0574Chemie (HOH)
Sequence modifications
A, B, C: 1 - 414 (UniProt: O75874)
PDBExternal DatabaseDetails
Ser 415-expression tag
Leu 416-expression tag
Glu 417-expression tag
His 418-expression tag
His 419-expression tag
His 420-expression tag
His 421-expression tag
His 422-expression tag
His 423-expression tag
His 424-expression tag
His 425-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight144464.2
Non-Polymers*Number of molecules9
Total formula weight2545.6
All*Total formula weight147009.8
*Water molecules are not included.

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PDB entries from 2025-07-30

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