6BKT
Crystal structure of the A/Michigan/15/2014 (H3N2) influenza virus hemagglutinin in complex with 6'-SLN
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Hemagglutinin | polymer | 323 | 35923.6 | 1 | UniProt (A0A0Y0S9M3) Pfam (PF00509) | Influenza A virus (A/Michigan/15/2014(H3N2)) | |
| 2 | B (B) | Hemagglutinin | polymer | 174 | 19996.2 | 1 | UniProt (A0A0Y0S9M3) Pfam (PF00509) UniProt (by SIFTS) (A0A0N9RDU4) | Influenza A virus (A/Michigan/15/2014(H3N2)) | |
| 3 | C, D, E, F (C, D, E, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 4 | G (G) | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 674.6 | 1 | In PDB BIRD (PRD_900046) GlyTouCan (G73578JC) | 6'-sialyl-N-acetyllactosamine | ||
| 5 | H, I, M (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 6 | J (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 7 | K, L, P, Q (A, B) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 8 | N, O (B) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 2 | Chemie (1PE) | |||
| 9 | R, S (A, B) | water | water | 18.0 | 474 | Chemie (HOH) |
Sequence modifications
A: 11 - 329 (UniProt: A0A0Y0S9M3)
| PDB | External Database | Details |
|---|---|---|
| Ala 7 | - | expression tag |
| Asp 8 | - | expression tag |
| Pro 9 | - | expression tag |
| Gly 10 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55919.8 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2372.2 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1630.6 | |
| All* | Total formula weight | 59922.5 |
