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6BG3

Structure of (3S,4S)-1-benzyl-4-(3-(3-(trifluoromethyl)phenyl)ureido)piperidin-3-yl acetate bound to DCN1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AEndolysin, DCN1-like protein 1 chimerapolymer38444307.41UniProt (P00720)
UniProt (Q96GG9)
Pfam (PF00959)
Pfam (PF03556)
In PDB
Enterobacteria phage T4DCUN1 domain-containing protein 1,Defective in cullin neddylation protein 1-like protein 1,Squamous cell carcinoma-related oncogene,Lysis protein,Lysozyme,Muramidase
2AN-{(3S,4S)-1-benzyl-3-[(1S)-1-hydroxyethoxy]piperidin-4-yl}-N'-[3-(trifluoromethyl)phenyl]ureanon-polymer437.51Chemie (DOJ)
3waterwater18.0678Chemie (HOH)
Sequence modifications
A: 1 - 164 (UniProt: P00720)
PDBExternal DatabaseDetails
Met -21-initiating methionine
Gly -20-expression tag
Ser -19-expression tag
Ser -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
Ser -11-expression tag
Gln -10-expression tag
Asp -9-expression tag
Leu -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Gly 12Arg 12conflict
Thr 54Cys 54conflict
Ala 97Cys 97conflict
Arg 137Ile 137conflict
Thr 146Ala 146conflict
A: 1062 - 1259 (UniProt: Q96GG9)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight44307.4
Non-Polymers*Number of molecules1
Total formula weight437.5
All*Total formula weight44744.8
*Water molecules are not included.

222036

PDB entries from 2024-07-03

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