6BEE
Crystal structure of VACV D13 in complex with Rifaximin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Scaffold protein D13 | polymer | 553 | 62076.7 | 3 | UniProt (P68440) Pfam (PF03340) | Vaccinia virus WR (VACV) | 62 kDa protein,Rifampicin resistance protein |
| 2 | D, H, J, K, L (A, B, C) | FORMIC ACID | non-polymer | 46.0 | 5 | Chemie (FMT) | |||
| 3 | E, F, I, M (A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 4 | G (B) | (2S,16Z,18E,20S,21S,22R,23R,24R,25S,26R,27S,28E)-5,6,21,23-tetrahydroxy-27-methoxy-2,4,11,16,20,22,24,26-octamethyl-1,1 5-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)furo[2'',3'':7',8']naphtho[1',2':4,5]imidazo[1,2-a]pyridin-2 5-yl acetate | non-polymer | 785.9 | 1 | Chemie (RXM) | |||
| 5 | N, O, P (A, B, C) | water | water | 18.0 | 278 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 551 (UniProt: P68440)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 186230.0 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1264.3 | |
| All* | Total formula weight | 187494.2 |
