6B7O
Crystal structure of Legionella effector sdeD (lpg2509) H67A in complex with ADP-ribosylated Ubiquitin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | SdeD (lpg2509) H67A | polymer | 383 | 43371.9 | 1 | UniProt (Q5ZSK8) Pfam (PF12252) | Legionella pneumophila | |
| 2 | B, C (B, C) | Polyubiquitin-C | polymer | 76 | 8576.8 | 2 | UniProt (P0CG48) Pfam (PF00240) | Homo sapiens (Human) | |
| 3 | D (B) | [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE | non-polymer | 559.3 | 1 | Chemie (AR6) | |||
| 4 | E, F, G (A, B, C) | water | water | 18.0 | 211 | Chemie (HOH) |
Sequence modifications
A: 2 - 382 (UniProt: Q5ZSK8)
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
| Met 1 | - | expression tag |
| Ala 67 | His 82 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 60525.6 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 559.3 | |
| All* | Total formula weight | 61084.9 |
