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6B40

BbRAGL-3'TIR synaptic complex with nicked DNA refined with C2 symmetry

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, ERAG1L,RAG1Lpolymer65874440.12UniProt (A0A185KID9)
Pfam (PF12940)
In PDB
Branchiostoma belcheri (Amphioxus)
2B, F31TIR intact strandpolymer6219218.32Branchiostoma belcheri31TIR intact strand
3C, G31TIR pre-nicked strand of signal DNApolymer4714357.22Branchiostoma belcheri31TIR pre-nicked strand of signal DNA
4D, H31TIR pre-nicked strand of flanking DNApolymer154602.02Branchiostoma belcheri31TIR pre-nicked strand of flanking DNA
5M, NRAG2Lpolymer36639509.32UniProt (A0A185KIE0)
In PDB
Branchiostoma belcheri (Amphioxus)
6A, ECALCIUM IONnon-polymer40.12Chemie (CA)
7A, EZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A, E: 468 - 1106 (UniProt: A0A185KID9)
A, E: 1107 - 1125 (PDB: 6B40)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight304253.8
Non-Polymers*Number of molecules4
Total formula weight211.0
All*Total formula weight304464.7
*Water molecules are not included.

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PDB entries from 2024-09-18

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