6AVF
Crystal structure of the KFJ5 TCR-NY-ESO-1-HLA-B*07:02 complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | M | Beta-2-microglobulin | polymer | 99 | 11748.2 | 1 | UniProt (P61769) Pfam (PF07654) In PDB | Homo sapiens (Human) | |
2 | A | T-cell receptor alpha variable 4,TCR alpha chain | polymer | 207 | 23191.7 | 1 | UniProt (A0A0B4J268) Pfam (PF07686) In PDB | Homo sapiens (Human) | |
3 | B | T-cell receptor beta variable 28,TCR beta chain | polymer | 244 | 28087.4 | 1 | UniProt (A0A5B6) Pfam (PF07686) In PDB | Homo sapiens (Human) | V_segment translation product |
4 | P | ALA-PRO-ARG-GLY-PRO-HIS-GLY-GLY-ALA-ALA-SER-GLY-LEU | polymer | 13 | 1149.3 | 1 | UniProt (by SIFTS) (P78358) In PDB | Homo sapiens | |
5 | H | HLA class I histocompatibility antigen, B-7 alpha chain | polymer | 362 | 40509.0 | 1 | UniProt (P01889) Pfam (PF00129) Pfam (PF07654) Pfam (PF06623) In PDB | Homo sapiens (Human) | MHC class I antigen B*7 |
6 | water | water | 18.0 | 447 | Chemie (HOH) |
Sequence modifications
A: 3 - 94 (UniProt: A0A0B4J268)
A: 94 - 208 (PDB: 6AVF)
B: 1 - 95 (UniProt: A0A5B6)
B: 96 - 243 (PDB: 6AVF)
PDB | External Database | Details |
---|---|---|
Met 2 | - | initiating methionine |
B: 1 - 95 (UniProt: A0A5B6)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Gln 95 | Leu 114 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 104685.6 | |
All* | Total formula weight | 104685.6 |