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5ZVC

P domain of GII.13 norovirus capsid complexed with Lewis A trisaccharide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Major capsid protein VP1polymer31734688.62UniProt (A0A0D6CBA8)
Pfam (PF08435)
Norovirus Hu/GII.13/10N4598/2010/NP
2C, D
(C, D)
beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched529.52In PDB
BIRD (PRD_900129)
GlyTouCan (G39023AU)
3E, F
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
4G, H
(A, B)
waterwater18.0659Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight69377.2
BranchedNumber of molecules2
Total formula weight1059.0
Non-Polymers*Number of molecules2
Total formula weight184.2
All*Total formula weight70620.4
*Water molecules are not included.

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PDB entries from 2025-06-25

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