5ZQE
Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Cefuroxime bound form
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Lmo2812 protein | polymer | 276 | 30091.6 | 8 | UniProt (Q8Y3M3) Pfam (PF00768) Pfam (PF00144) In PDB | Listeria monocytogenes EGD-e | |
2 | G, H, A, B, C... | 2-[CARBOXY-(2-FURAN-2-YL-2-METHOXYIMINO-ACETYLAMINO)-METHYL]-5-METHYL-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID | non-polymer | 383.4 | 8 | Chemie (CES) | |||
3 | G, H, A, B, C... | GLYCEROL | non-polymer | 92.1 | 16 | Chemie (GOL) | |||
4 | G | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
5 | water | water | 18.0 | 921 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H: 21 - 272 (UniProt: Q8Y3M3)
PDB | External Database | Details |
---|---|---|
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
His 1 | - | expression tag |
His 2 | - | expression tag |
Asp 3 | - | expression tag |
Tyr 4 | - | expression tag |
Asp 5 | - | expression tag |
Ile 6 | - | expression tag |
Pro 7 | - | expression tag |
Thr 8 | - | expression tag |
Thr 9 | - | expression tag |
Glu 10 | - | expression tag |
Asn 11 | - | expression tag |
Leu 12 | - | expression tag |
Tyr 13 | - | expression tag |
Phe 14 | - | expression tag |
Gln 15 | - | expression tag |
Gly 16 | - | expression tag |
Ala 17 | - | expression tag |
Met 18 | - | expression tag |
Gly 19 | - | expression tag |
Ser 20 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 240732.8 | |
Non-Polymers* | Number of molecules | 25 |
Total formula weight | 4646.6 | |
All* | Total formula weight | 245379.5 |