5ZQC

Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the Ampicillin bound form

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D (A, B, C, D)	Lmo2812 protein	polymer	276	30091.6	4	UniProt (Q8Y3M3) Pfam (PF00768) Pfam (PF00144)	Listeria monocytogenes EGD-e
2	E, G, I, K (A, B, C, D)	(2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid	non-polymer		351.4	4	Chemie (AIX)
3	F, H, J, L (A, B, C, D)	GLYCEROL	non-polymer		92.1	4	Chemie (GOL)
4	M, N, O, P (A, B, C, D)	water	water		18.0	292	Chemie (HOH)

Sequence modifications

A, B, C, D: 21 - 272 (UniProt: Q8Y3M3)

PDB	External Database	Details
His -3	-	expression tag
His -2	-	expression tag
His -1	-	expression tag
His 0	-	expression tag
His 1	-	expression tag
His 2	-	expression tag
Asp 3	-	expression tag
Tyr 4	-	expression tag
Asp 5	-	expression tag
Ile 6	-	expression tag
Pro 7	-	expression tag
Thr 8	-	expression tag
Thr 9	-	expression tag
Glu 10	-	expression tag
Asn 11	-	expression tag
Leu 12	-	expression tag
Tyr 13	-	expression tag
Phe 14	-	expression tag
Gln 15	-	expression tag
Gly 16	-	expression tag
Ala 17	-	expression tag
Met 18	-	expression tag
Gly 19	-	expression tag
Ser 20	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	4
	Total formula weight	120366.4
Non-Polymers*	Number of molecules	8
	Total formula weight	1774.1
All*	Total formula weight	122140.5

*Water molecules are not included.