5ZLU

Ribosome Structure bound to ABC-F protein.

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (W)	RNA (25-mer)	polymer	25	8157.0	1		Thermus thermophilus HB8
2	B (A)	30S ribosomal protein S17	polymer	104	12193.5	1	UniProt (P24321) Pfam (PF00366) UniProt (by SIFTS) (P0DOY7)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
3	C (B)	30S ribosomal protein S18	polymer	73	8483.2	1	UniProt (P80382) Pfam (PF01084) UniProt (by SIFTS) (Q5SLQ0)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
4	D (C)	30S ribosomal protein S20	polymer	106	11736.1	1	UniProt (P80380) Pfam (PF01649)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
5	E (D)	30S ribosomal protein S19	polymer	93	10605.5	1	UniProt (Q5SHP2) Pfam (PF00203)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
6	F (E)	30S ribosomal protein S10	polymer	105	11955.0	1	UniProt (Q5SHN7) Pfam (PF00338)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
7	G (F)	30S ribosomal protein Thx	polymer	27	3350.0	1	UniProt (Q5SIH3) Pfam (PF17070)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)	S31
8	H (G)	16S ribosomal RNA	polymer	1514	491471.9	1		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
9	I (H)	30S ribosomal protein S2	polymer	256	29317.7	1	UniProt (P80371) Pfam (PF00318)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
10	J (I)	30S ribosomal protein S3	polymer	239	26751.1	1	UniProt (P80372) Pfam (PF07650) Pfam (PF00189)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
11	K (J)	30S ribosomal protein S4	polymer	209	24373.4	1	UniProt (P80373) Pfam (PF00163) Pfam (PF01479)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
12	L (K)	30S ribosomal protein S5	polymer	162	17583.4	1	UniProt (Q5SHQ5) Pfam (PF00333) Pfam (PF03719)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
13	M (L)	30S ribosomal protein S6	polymer	101	11988.8	1	UniProt (Q5SLP8) Pfam (PF01250)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)	TS9
14	N (M)	30S ribosomal protein S7	polymer	156	18051.0	1	UniProt (P17291) Pfam (PF00177)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
15	O (N)	30S ribosomal protein S8	polymer	138	15868.6	1	UniProt (P0DOY9) Pfam (PF00410)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
16	P (O)	30S ribosomal protein S9	polymer	128	14410.6	1	UniProt (P80374) Pfam (PF00380)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
17	Q (P)	30S ribosomal protein S11	polymer	129	13737.9	1	UniProt (P80376) Pfam (PF00411)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
18	R (Q)	30S ribosomal protein S12	polymer	132	14637.4	1	UniProt (Q5SHN3) Pfam (PF00164)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
19	S (R)	30S ribosomal protein S13	polymer	126	14338.9	1	UniProt (P80377) Pfam (PF00416)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
20	T (S)	30S ribosomal protein S14 type Z	polymer	61	7158.7	1	UniProt (P0DOY6) Pfam (PF00253)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
21	U (T)	30S ribosomal protein S15	polymer	89	10578.4	1	UniProt (Q5SJ76) Pfam (PF00312)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
22	V (U)	30S ribosomal protein S16	polymer	88	10410.0	1	UniProt (Q5SJH3) Pfam (PF00886)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
23	W (V)	23S ribosomal RNA	polymer	2875	935028.4	1		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
24	X (X)	5S ribosomal RNA	polymer	123	39846.8	1	GenBank (37223181)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
25	Y (Y)	50S ribosomal protein L1	polymer	229	24867.7	1	UniProt (P27150) Pfam (PF00687) UniProt (by SIFTS) (Q5SLP7)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
26	Z (Z)	50S ribosomal protein L2	polymer	276	30532.6	1	UniProt (P60405) Pfam (PF00181) Pfam (PF03947)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
27	AA (a)	50S ribosomal protein L3	polymer	206	22450.2	1	UniProt (Q5SHN8) Pfam (PF00297)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
28	BA (b)	50S ribosomal protein L4	polymer	210	23271.9	1	UniProt (Q5SHN9) Pfam (PF00573)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)	L1e
29	CA (c)	50S ribosomal protein L5	polymer	182	21061.6	1	UniProt (Q5SHQ0) Pfam (PF00281) Pfam (PF00673)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
30	DA (d)	50S ribosomal protein L6	polymer	180	19568.9	1	UniProt (P0DOY8) Pfam (PF00347)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
31	EA (e)	50S ribosomal protein L10	polymer	173	18586.6	1	UniProt (Q8VVE3) Pfam (PF00466)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
32	FA (f)	50S ribosomal protein L11	polymer	147	15526.1	1	UniProt (Q5SLP6) Pfam (PF03946) Pfam (PF00298)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
33	GA (g)	50S ribosomal protein L13	polymer	140	15927.9	1	UniProt (P60488) Pfam (PF00572)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
34	HA (h)	50S ribosomal protein L14	polymer	122	13309.6	1	UniProt (P60558) Pfam (PF00238) UniProt (by SIFTS) (Q5SHP8)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
35	IA (i)	50S ribosomal protein L15	polymer	150	16319.1	1	UniProt (Q5SHQ7) Pfam (PF00828)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
36	JA (j)	50S ribosomal protein L16	polymer	141	15993.9	1	UniProt (P60489) Pfam (PF00252)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
37	KA (k)	50S ribosomal protein L17	polymer	118	13750.1	1	UniProt (Q9Z9H5) Pfam (PF01196)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
38	LA (l)	50S ribosomal protein L18	polymer	112	12639.8	1	UniProt (Q5SHQ4) Pfam (PF00861)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)	TL24
39	MA (m)	50S ribosomal protein L19	polymer	146	17188.8	1	UniProt (P60490) Pfam (PF01245)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
40	NA (n)	50S ribosomal protein L20	polymer	118	13779.3	1	UniProt (P60491) Pfam (PF00453)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
41	OA (o)	50S ribosomal protein L21	polymer	101	11069.2	1	UniProt (P60492) Pfam (PF00829)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
42	PA (p)	50S ribosomal protein L22	polymer	113	12808.1	1	UniProt (Q5SHP3) Pfam (PF00237)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
43	QA (q)	50S ribosomal protein L23	polymer	96	10759.8	1	UniProt (Q5SHP0) Pfam (PF00276)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
44	RA (r)	50S ribosomal protein L24	polymer	110	12085.6	1	UniProt (Q5SHP9) Pfam (PF00467) Pfam (PF17136)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
45	SA (s)	50S ribosomal protein L25	polymer	206	23238.6	1	UniProt (Q5SHZ1) Pfam (PF01386) Pfam (PF14693)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)	TL5
46	TA (t)	50S ribosomal protein L27	polymer	85	9529.1	1	UniProt (P60493) Pfam (PF01016)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
47	UA (u)	50S ribosomal protein L29	polymer	67	8112.6	1	UniProt (Q9LCY4) Pfam (PF00831) UniProt (by SIFTS) (Q5SHP6)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
48	VA (v)	50S ribosomal protein L30	polymer	60	6799.1	1	UniProt (Q5SHQ6) Pfam (PF00327)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
49	CB, WA (w, CC)	50S ribosomal protein L31	polymer	71	8300.5	2	UniProt (Q5SJE1) Pfam (PF01197)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
50	XA (x)	50S ribosomal protein L32	polymer	60	6722.1	1	UniProt (P80339) Pfam (PF01783)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
51	YA (y)	50S ribosomal protein L33	polymer	54	6632.9	1	UniProt (P35871) Pfam (PF00471)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
52	ZA (z)	50S ribosomal protein L34	polymer	49	6132.4	1	UniProt (P80340) Pfam (PF00468)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
53	AB (AA)	50S ribosomal protein L35	polymer	65	7506.2	1	UniProt (Q5SKU1) Pfam (PF01632)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
54	BB (BB)	50S ribosomal protein L36	polymer	37	4435.4	1	UniProt (Q5SHR2) Pfam (PF00444)	Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)	Ribosomal protein B
55	DB (DD)	P-site tRNA	polymer	77	24885.0	1		Thermus thermophilus HB8
56	EB (EE)	Macrolide efflux protein	polymer	497	55706.5	1	UniProt (A0A1I9WCL8) Pfam (PF12848) Pfam (PF00005)	Pseudomonas aeruginosa	Mel
57	FB, GB (Z, i)	MAGNESIUM ION	non-polymer		24.3	2	Chemie (MG)
58	HB, IB (EE)	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	non-polymer		506.2	2	Chemie (ANP)

Sequence modifications

y: 1 - 54 (UniProt: P35871)

PDB	External Database	Details
Leu 7	Ile 7	see sequence details

EE: 1 - 491 (UniProt: A0A1I9WCL8)

PDB	External Database	Details
His 492	-	expression tag
His 493	-	expression tag
His 494	-	expression tag
His 495	-	expression tag
His 496	-	expression tag
His 497	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	57
	Total formula weight	2279830.9
Non-Polymers*	Number of molecules	4
	Total formula weight	1061.0
All*	Total formula weight	2280891.9

*Water molecules are not included.