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5ZKI

Human EXOG-H140A in complex with duplex DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, F
(A, B)
Nuclease EXOG, mitochondrialpolymer34839216.32UniProt (Q9Y2C4)
Pfam (PF01223)
Pfam (PF18026)
Homo sapiens (Human)Endonuclease G-like 1,Endo G-like 1
2B, C, D, E
(C, D, E, F)
DNA (5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3')polymer123663.44synthetic construct
3G, J
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
4H, I, K
(C, E, B)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
5L, M, N, O, P...
(A, C, D, E, F...)
waterwater18.0111Chemie (HOH)
Sequence modifications
A, B: 42 - 368 (UniProt: Q9Y2C4)
PDBExternal DatabaseDetails
Met 21-expression tag
Gly 22-expression tag
Ser 23-expression tag
Ser 24-expression tag
His 25-expression tag
His 26-expression tag
His 27-expression tag
His 28-expression tag
His 29-expression tag
His 30-expression tag
Ser 31-expression tag
Ser 32-expression tag
Gly 33-expression tag
Leu 34-expression tag
Val 35-expression tag
Pro 36-expression tag
Arg 37-expression tag
Gly 38-expression tag
Ser 39-expression tag
His 40-expression tag
Met 41-expression tag
Ala 140His 140engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight93086.1
Non-Polymers*Number of molecules5
Total formula weight143.8
All*Total formula weight93229.9
*Water molecules are not included.

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PDB entries from 2025-12-17

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