Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZE0

Hairpin Forming Complex, RAG1/2-Nicked(with Dideoxy) 12RSS/23RSS complex in Mg2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, Cmouse RAG1polymer62771871.32UniProt (P15919)
Pfam (PF12940)
In PDB
Mus musculus (Mouse)RAG-1
2B, Dmouse RAG2polymer38943225.72UniProt (P21784)
Pfam (PF03089)
In PDB
Mus musculus (Mouse)RAG-2
3NHMGB1 A-B boxpolymer16318897.91UniProt (P63158)
Pfam (PF09011)
Pfam (PF00505)
In PDB
Mus musculus (Mouse)High mobility group protein 1,HMG-1
4FDNA (45-MER)polymer4513979.01synthetic construct
5IDNA (5'-D(*AP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3')polymer164864.21synthetic construct
6JDNA (5'-D(*TP*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3')polymer164855.11synthetic construct
7GDNA (54-MER)polymer5416640.71synthetic construct
8LDNA (30-MER)polymer309138.91synthetic construct
9MDNA (39-MER)polymer3912036.81synthetic construct
10A, CMAGNESIUM IONnon-polymer24.32Chemie (MG)
11A, CZINC IONnon-polymer65.42Chemie (ZN)
12A, C1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
13A, CPOTASSIUM IONnon-polymer39.12Chemie (K)
14waterwater18.0169Chemie (HOH)
Sequence modifications
A, C: 384 - 1008 (UniProt: P15919)
PDBExternal DatabaseDetails
Gly 382-cloning artifact
Pro 383-cloning artifact
B, D: 1 - 387 (UniProt: P21784)
PDBExternal DatabaseDetails
Gly -1-cloning artifact
Pro 0-cloning artifact
Val 1Met 1engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight310606.6
Non-Polymers*Number of molecules9
Total formula weight443.8
All*Total formula weight311050.4
*Water molecules are not included.

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon