5Z1A
The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Putative beta-galactosidase | polymer | 680 | 77892.7 | 1 | UniProt (Q5LIC7) Pfam (PF02837) Pfam (PF00703) Pfam (PF02836) Pfam (PF16355) | Bacteroides fragilis NCTC 9343 | |
| 2 | B (A) | (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid | non-polymer | 161.2 | 1 | Chemie (SJ5) | |||
| 3 | C (A) | water | water | 18.0 | 834 | Chemie (HOH) |
Sequence modifications
A: 38 - 690 (UniProt: Q5LIC7)
| PDB | External Database | Details |
|---|---|---|
| Met 16 | - | initiating methionine |
| Gly 17 | - | expression tag |
| Ser 18 | - | expression tag |
| Ser 19 | - | expression tag |
| His 20 | - | expression tag |
| His 21 | - | expression tag |
| His 22 | - | expression tag |
| His 23 | - | expression tag |
| His 24 | - | expression tag |
| His 25 | - | expression tag |
| Ser 26 | - | expression tag |
| Ser 27 | - | expression tag |
| Gly 28 | - | expression tag |
| Leu 29 | - | expression tag |
| Val 30 | - | expression tag |
| Pro 31 | - | expression tag |
| Arg 32 | - | expression tag |
| Gly 33 | - | expression tag |
| Ser 34 | - | expression tag |
| Met 35 | - | expression tag |
| Ser 36 | - | expression tag |
| Leu 37 | - | expression tag |
| Glu 691 | - | expression tag |
| Asp 692 | - | expression tag |
| Arg 693 | - | expression tag |
| Glu 694 | - | expression tag |
| Gly 695 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 77892.7 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 161.2 | |
| All* | Total formula weight | 78053.9 |
