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5YX2

Crystal structure of DNMT3A-DNMT3L in complex with DNA containing two CpG sites

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, D)
DNA (cytosine-5)-methyltransferase 3Apolymer28532715.72UniProt (Q9Y6K1)
Pfam (PF00145)
Homo sapiens (Human)Dnmt3a,DNA methyltransferase HsaIIIA,M.HsaIIIA
2B, D
(B, C)
DNA (cytosine-5)-methyltransferase 3-likepolymer20824050.52UniProt (Q9UJW3)Homo sapiens (Human)
3E, F
(E, F)
DNA (25-MER)polymer257699.02synthetic construct
4G, H, I, J, L...
(A, D, E)
GLYCEROLnon-polymer92.16Chemie (GOL)
5K, M
(A, D)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
6O, P, Q, R, S...
(A, B, D, C, E...)
waterwater18.075Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight128930.5
Non-Polymers*Number of molecules8
Total formula weight1321.4
All*Total formula weight130251.9
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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