5YTO
Crystal Structure of human Superoxide Dismutase I (hSOD1) in complex with a napthalene-catechol linked compound.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Superoxide dismutase [Cu-Zn] | polymer | 180 | 19092.2 | 10 | UniProt (P00441) Pfam (PF00080) | Homo sapiens (Human) | Superoxide dismutase 1,hSod1 |
| 2 | BA, K, M, Q, T... (I, A, B, C, D...) | ZINC ION | non-polymer | 65.4 | 9 | Chemie (ZN) | |||
| 3 | L, N, R (A, B, C) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 4 | AA, O, U (H, B, D) | 4-[(1~{R})-2-(naphthalen-2-ylmethylamino)-1-oxidanyl-ethyl]benzene-1,2-diol | non-polymer | 309.4 | 3 | Chemie (946) | |||
| 5 | P, S, W (B, C, E) | PENTASULFIDE-SULFUR | non-polymer | 160.3 | 3 | Chemie (PS5) | |||
| 6 | CA, DA, EA, FA, GA... (A, B, C, D, E...) | water | water | 18.0 | 1489 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J: 0 - 153 (UniProt: P00441)
| PDB | External Database | Details |
|---|---|---|
| Met -26 | - | initiating methionine |
| Lys -25 | - | expression tag |
| His -24 | - | expression tag |
| His -23 | - | expression tag |
| His -22 | - | expression tag |
| His -21 | - | expression tag |
| His -20 | - | expression tag |
| His -19 | - | expression tag |
| Pro -18 | - | expression tag |
| Met -17 | - | expression tag |
| Ser -16 | - | expression tag |
| Asp -15 | - | expression tag |
| Tyr -14 | - | expression tag |
| Asp -13 | - | expression tag |
| Ile -12 | - | expression tag |
| Pro -11 | - | expression tag |
| Thr -10 | - | expression tag |
| Thr -9 | - | expression tag |
| Glu -8 | - | expression tag |
| Asn -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Tyr -5 | - | expression tag |
| Phe -4 | - | expression tag |
| Gln -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ala -1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 190922.2 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 2274.0 | |
| All* | Total formula weight | 193196.2 |






