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5YT2

Crystal structure of the human vitamin D receptor ligand binding domain complexed with (1R,2S,3R)-5-[(E)-2-{(1R,3aS,7aR)-1-[(R)-6-hydroxy-6-methylheptan-2-yl]-7a-methyl-2,3,3a,6,7,7a-hexahydro-1H-inden-4-yl}vinyl]-2-(3-hydroxypropyl)cyclohex-4-ene-1,3-diol

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AVitamin D3 receptorpolymer25528948.41UniProt (P11473)
Pfam (PF00104)
In PDB
Homo sapiens (Human)VDR,1,25-dihydroxyvitamin D3 receptor,Nuclear receptor subfamily 1 group I member 1
2A(1R,2S,3R)-5-[(E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-1,2,3,3a,6,7-hexahydroinden-4-yl]ethenyl]-2-(3-oxidanylpropyl)cyclohex-4-ene-1,3-diolnon-polymer460.71Chemie (90O)
3waterwater18.0151Chemie (HOH)
Sequence modifications
A: 118 - 164 (UniProt: P11473)
A: 216 - 423 (UniProt: P11473)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight28948.4
Non-Polymers*Number of molecules1
Total formula weight460.7
All*Total formula weight29409.1
*Water molecules are not included.

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PDB entries from 2024-06-12

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