5YSD
Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophorotriose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Lin1841 protein | polymer | 397 | 44582.1 | 2 | UniProt (Q92AS8) Pfam (PF01547) | Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) | beta-1,2-glucooligosaccharide binding protein |
| 2 | C, D (C, D) | beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-alpha-D-glucopyranose | branched | 504.4 | 2 | In PDB GlyTouCan (G84119DY) | |||
| 3 | E, F, G, I, J (A, B) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 5 | Chemie (MPD) | |||
| 4 | H (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 5 | K, L (A, B) | water | water | 18.0 | 286 | Chemie (HOH) |
Sequence modifications
A, B: 27 - 414 (UniProt: Q92AS8)
| PDB | External Database | Details |
|---|---|---|
| Met 26 | - | expression tag |
| Leu 415 | - | expression tag |
| Glu 416 | - | expression tag |
| His 417 | - | expression tag |
| His 418 | - | expression tag |
| His 419 | - | expression tag |
| His 420 | - | expression tag |
| His 421 | - | expression tag |
| His 422 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 89164.2 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1008.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 615.2 | |
| All* | Total formula weight | 90788.3 |






