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5YSD

Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophorotriose

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Lin1841 proteinpolymer39744582.12UniProt (Q92AS8)
Pfam (PF01547)
Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)beta-1,2-glucooligosaccharide binding protein
2C, D
(C, D)
beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-alpha-D-glucopyranosebranched504.42In PDB
GlyTouCan (G84119DY)
3E, F, G, I, J
(A, B)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.25Chemie (MPD)
4H
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5K, L
(A, B)
waterwater18.0286Chemie (HOH)
Sequence modifications
A, B: 27 - 414 (UniProt: Q92AS8)
PDBExternal DatabaseDetails
Met 26-expression tag
Leu 415-expression tag
Glu 416-expression tag
His 417-expression tag
His 418-expression tag
His 419-expression tag
His 420-expression tag
His 421-expression tag
His 422-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight89164.2
BranchedNumber of molecules2
Total formula weight1008.9
Non-Polymers*Number of molecules6
Total formula weight615.2
All*Total formula weight90788.3
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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