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5YR6

Human methionine aminopeptidase type 1b (F309L mutant) in complex with TNP470

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Methionine aminopeptidase 1polymer30434144.91UniProt (P53582)
Pfam (PF00557)
Homo sapiens (Human)MetAP 1,Peptidase M 1
2B, C
(A)
COBALT (II) IONnon-polymer58.92Chemie (CO)
3D
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
4E
(A)
(1R,2S,3S,4R)-4-hydroxy-2-methoxy-4-methyl-3-[(2R,3R)-2-methyl-3-(3-methylbut-2-en-1-yl)oxiran-2-yl]cyclohexyl (chloroacetyl)carbamatenon-polymer403.91Chemie (TN4)
5F
(A)
waterwater18.0164Chemie (HOH)
Sequence modifications
A: 90 - 393 (UniProt: P53582)
PDBExternal DatabaseDetails
Leu 309Phe 300engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight34144.9
Non-Polymers*Number of molecules4
Total formula weight544.8
All*Total formula weight34689.6
*Water molecules are not included.

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PDB entries from 2025-06-25

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