5YPI
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI1 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Metallo-beta-lactamase NDM-1 | polymer | 242 | 25631.8 | 8 | UniProt (A0A0A7Y424) Pfam (PF00753) UniProt (by SIFTS) (E5KIY2) | Escherichia coli | |
| 2 | AA, BA, EA, FA, HA... (E, F, G, A, H...) | ZINC ION | non-polymer | 65.4 | 16 | Chemie (ZN) | |||
| 3 | CA, GA, JA, K, NA... (E, F, G, A, H...) | (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid | non-polymer | 317.4 | 8 | Chemie (8YF) | |||
| 4 | KA, L, OA, P, T... (G, A, H, B, C...) | SULFATE ION | non-polymer | 96.1 | 7 | Chemie (SO4) | |||
| 5 | V (C) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | DA (E) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 7 | PA, QA, RA, SA, TA... (A, B, C, D, E...) | water | water | 18.0 | 872 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 205054.6 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 4385.4 | |
| All* | Total formula weight | 209440.0 |
