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5YKB

The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site conformation

Replaces:  5GTV
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Trehalose synthasepolymer57165020.94UniProt (I3NX86)
Pfam (PF00128)
Pfam (PF16657)
Deinococcus radiodurans str. R1
2E, G, I, K
(A, B, C, D)
CALCIUM IONnon-polymer40.14Chemie (CA)
3F, H, J, L
(A, B, C, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
4M, N, O, P
(A, B, C, D)
waterwater18.0237Chemie (HOH)
Sequence modifications
A, B, C, D: 2 - 552 (UniProt: I3NX86)
PDBExternal DatabaseDetails
Met -1-expression tag
Val 0-expression tag
Pro 1-expression tag
Trp 97Arg 97engineered mutation
Phe 253Asn 253engineered mutation
Ile 313Thr 313engineered mutation
Val 380Ile 380engineered mutation
Ser 553-expression tag
Arg 554-expression tag
Val 555-expression tag
Asp 556-expression tag
Lys 557-expression tag
Leu 558-expression tag
Ala 559-expression tag
Ala 560-expression tag
Ala 561-expression tag
Leu 562-expression tag
Glu 563-expression tag
His 564-expression tag
His 565-expression tag
His 566-expression tag
His 567-expression tag
His 568-expression tag
His 569-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight260083.7
Non-Polymers*Number of molecules8
Total formula weight257.5
All*Total formula weight260341.2
*Water molecules are not included.

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PDB entries from 2025-07-30

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