5YGA
Crystal structure of ribose-1,5-bisphosphate isomerase mutant D204N from Pyrococcus horikoshii OT3 in complex with ribose-1,5-bisphosphate, AMP and GMP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Ribose 1,5-bisphosphate isomerase | polymer | 324 | 36455.4 | 3 | UniProt (O57947) Pfam (PF01008) | Pyrococcus horikoshii | |
| 2 | D, H, L (A, B, C) | 1,5-di-O-phosphono-alpha-D-ribofuranose | non-polymer | 310.1 | 3 | Chemie (RI2) | |||
| 3 | E (A) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 4 | F, I, M (A, B, C) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 3 | Chemie (AMP) | |||
| 5 | G, J, N (A, B, C) | POTASSIUM ION | non-polymer | 39.1 | 3 | Chemie (K) | |||
| 6 | K, O (B, C) | GUANOSINE-5'-MONOPHOSPHATE | non-polymer | 363.2 | 2 | Chemie (5GP) | |||
| 7 | P, Q, R (A, B, C) | water | water | 18.0 | 301 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 324 (UniProt: O57947)
| PDB | External Database | Details |
|---|---|---|
| Asn 204 | Asp 204 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 109366.1 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 2933.8 | |
| All* | Total formula weight | 112299.9 |
