5YDL

The crystal structure of the Acyl Transferase domain of SpnD complex with 2-(pent-4-yn-1-yl)malonyl

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	PKS	polymer	433	46248.4	1	UniProt (A0A0E3JLZ0) Pfam (PF16197) Pfam (PF00698) In PDB	Streptomyces sp. CNQ431
2	A	(2R)-2-methanoylhept-6-ynoic acid	non-polymer		154.2	1	Chemie (DUV)
3		water	water		18.0	149	Chemie (HOH)

Sequence modifications

A: 2 - 406 (UniProt: A0A0E3JLZ0)

PDB	External Database	Details
Met -26	-	expression tag
Gly -25	-	expression tag
Ser -24	-	expression tag
His -23	-	expression tag
His -22	-	expression tag
His -21	-	expression tag
His -20	-	expression tag
His -19	-	expression tag
His -18	-	expression tag
His -17	-	expression tag
His -16	-	expression tag
Gly -15	-	expression tag
Ser -14	-	expression tag
Asp -13	-	expression tag
Tyr -12	-	expression tag
Asp -11	-	expression tag
Ile -10	-	expression tag
Pro -9	-	expression tag
Thr -8	-	expression tag
Thr -7	-	expression tag
Glu -6	-	expression tag
Asn -5	-	expression tag
Leu -4	-	expression tag
Tyr -3	-	expression tag
Phe -2	-	expression tag
Gln -1	-	expression tag
Gly 0	-	expression tag
Ser 1	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	46248.4
Non-Polymers*	Number of molecules	1
	Total formula weight	154.2
All*	Total formula weight	46402.6

*Water molecules are not included.