5Y9A
Crystal structure of the complex of peptidyl tRNA hydrolase with a phosphate ion at the substrate binding site and cytarabine at a new ligand binding site at 1.1 A resolution
Replaces: 4LWREntity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Peptidyl-tRNA hydrolase | polymer | 196 | 21250.2 | 1 | UniProt (D0C9L6) Pfam (PF01195) | Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81) | PTH |
| 2 | B (A) | CYTARABINE | non-polymer | 243.2 | 1 | Chemie (AR3) | |||
| 3 | C (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 4 | D (A) | water | water | 18.0 | 245 | Chemie (HOH) |
Sequence modifications
A: 1 - 193 (UniProt: D0C9L6)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 21250.2 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 338.2 | |
| All* | Total formula weight | 21588.4 |
