5Y7M
Crystal structure of PhoRpp38 bound to a K-turn in P12.1 helix
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | 50S ribosomal protein L7Ae | polymer | 132 | 14645.0 | 2 | UniProt (P62009) | Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) | Ribonuclease P protein component Rpp38,RNase P component Rpp38,Ribosomal protein L8e |
| 2 | B, D (B, D) | RNA (52-MER) | polymer | 51 | 16552.9 | 2 | Pyrococcus horikoshii OT3 | ||
| 3 | E, L (B, D) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 2 | Chemie (GTP) PubChem (177679032) PubChem (135400627) PubChem (135487750) PubChem (136088935) PubChem (136803486) PubChem (135398633) PubChem (135544356) PubChem (135547949) PubChem (135600366) PubChem (135749822) PubChem (136005188) PubChem (136073923) PubChem (136240914) PubChem (136664747) PubChem (136772743) PubChem (136772744) PubChem (136803487) PubChem (137286749) PubChem (164715984) PubChem (171699466) | |||
| 4 | F, G, H, I, J... (B, C, D) | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) |
Sequence modifications
A, C: 2 - 124 (UniProt: P62009)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Leu 125 | - | expression tag |
| Glu 126 | - | expression tag |
| His 127 | - | expression tag |
| His 128 | - | expression tag |
| His 129 | - | expression tag |
| His 130 | - | expression tag |
| His 131 | - | expression tag |
| His 132 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 62395.9 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1910.9 | |
| All* | Total formula weight | 64306.8 |
