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5Y2F

Human SIRT6 in complex with allosteric activator MDL-801

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NAD-dependent protein deacetylase sirtuin-6polymer31635003.11UniProt (Q8N6T7)
Pfam (PF02146)
Homo sapiens (Human)Regulatory protein SIR2 homolog 6,SIR2-like protein 6
2B
(C)
9-mer peptide QTARKSTGGpolymer9907.01UniProt (by SIFTS) (P68431)Homo sapiens
3C
(A)
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATEnon-polymer559.31Chemie (AR6)
4D
(A)
5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acidnon-polymer612.31Chemie (8L9)
5E
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
6F, G, H, I, J
(A)
GLYCEROLnon-polymer92.15Chemie (GOL)
7K, L, M, N, O...
(A, C)
SULFATE IONnon-polymer96.17Chemie (SO4)
8Q
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
9R
(C)
HEXADECANE-1-SULFINIC ACIDnon-polymer290.51Chemie (HDR)
10T, U
(A, C)
waterwater18.0132Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight35910.1
Non-Polymers*Number of molecules17
Total formula weight2766.5
All*Total formula weight38676.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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