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5Y2F

Human SIRT6 in complex with allosteric activator MDL-801

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NAD-dependent protein deacetylase sirtuin-6polymer31635003.11UniProt (Q8N6T7)
Pfam (PF02146)
Homo sapiens (Human)Regulatory protein SIR2 homolog 6,SIR2-like protein 6
2B
(C)
9-mer peptide QTARKSTGGpolymer9907.01UniProt (by SIFTS) (P68431)Homo sapiens
3C
(A)
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATEnon-polymer559.31Chemie (AR6)
PubChem (192)
PubChem (25113622)
PubChem (25113623)
PubChem (44415180)
PubChem (51051599)
PubChem (44144391)
PubChem (445794)
PubChem (447048)
PubChem (89379870)
PubChem (33576)
PubChem (447165)
PubChem (448826)
PubChem (91746164)
PubChem (9548001)
PubChem (9547960)
PubChem (122606931)
PubChem (122609061)
PubChem (10437766)
PubChem (174159053)
PubChem (140853820)
PubChem (146879505)
PubChem (162774256)
PubChem (162782217)
PubChem (163972867)
PubChem (173750345)
PubChem (173750346)
PubChem (175675949)
4D
(A)
5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acidnon-polymer612.31Chemie (8L9)
PubChem (134717373)
5E
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
6F, G, H, I, J
(A)
GLYCEROLnon-polymer92.15Chemie (GOL)
PubChem (753)
7K, L, M, N, O...
(A, C)
SULFATE IONnon-polymer96.17Chemie (SO4)
8Q
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
PubChem (8117)
9R
(C)
HEXADECANE-1-SULFINIC ACIDnon-polymer290.51Chemie (HDR)
PubChem (6914363)
10T, U
(A, C)
waterwater18.0132Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight35910.1
Non-Polymers*Number of molecules17
Total formula weight2766.5
All*Total formula weight38676.6
*Water molecules are not included.

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PDB entries from 2026-05-06

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