Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XY3

Large subunit of Trichomonas vaginalis ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(1)
25S ribosomal RNApolymer2765892223.31GenBank (7243609)Trichomonas vaginalis
2B
(3)
5S ribosomal RNApolymer11837963.61GenBank (68235680)Trichomonas vaginalis
3C
(4)
5.8S ribosomal RNApolymer16252173.91GenBank (461415)Trichomonas vaginalis
4D
(A)
Ribosomal protein L8, putativepolymer25126949.11UniProt (A2E6Z8)
Pfam (PF00181)
Pfam (PF03947)
Trichomonas vaginalisuL2
5E
(B)
Uncharacterized proteinpolymer41546904.31UniProt (A2DD62)
Pfam (PF00297)
Trichomonas vaginalisuL3
6F
(C)
Ribosomal protein, putativepolymer37040320.71UniProt (A2E4D0)
Pfam (PF00573)
Pfam (PF14374)
Trichomonas vaginalisuL4
7G
(D)
Ribosomal protein L5polymer30834932.81UniProt (A2DNM5)
Pfam (PF17144)
Pfam (PF14204)
Trichomonas vaginalisuL18
8H
(E)
60S ribosomal protein L6, putativepolymer15116045.81UniProt (A2FXW1)Trichomonas vaginaliseL6
9I
(F)
Ribosomal protein L30p/L7e, putativepolymer23926842.31UniProt (A2F592)
Pfam (PF08079)
Pfam (PF00327)
Trichomonas vaginalisuL30
10J
(G)
Ribosomal protein L7Ae, putativepolymer24427602.31UniProt (A2ET60)
Pfam (PF01248)
Trichomonas vaginaliseL8
11K
(H)
Ribosomal protein L6, putativepolymer19722930.51UniProt (A2DDT1)Trichomonas vaginalisuL6
12L
(I)
Ribosomal protein, putativepolymer20923800.81UniProt (A2FVZ6)
Pfam (PF00252)
Trichomonas vaginalisuL16
13M
(J)
60S ribosomal protein L11, putativepolymer16919373.51UniProt (A2E7L8)
Pfam (PF00281)
Pfam (PF00673)
Trichomonas vaginalisuL5
14N
(L)
Ribosomal protein L13e, putativepolymer18921865.71UniProt (A2G4E1)
Pfam (PF01294)
Trichomonas vaginaliseL13
15O
(M)
Ribosomal protein L14, putativepolymer12814726.11UniProt (A2DZ49)
Pfam (PF01929)
Trichomonas vaginaliseL14
16P
(N)
Ribosomal protein L15polymer20424323.51UniProt (A2ECR7)
Pfam (PF00827)
Trichomonas vaginaliseL15
17Q
(O)
Ribosomal protein L13, putativepolymer20022569.11UniProt (A2DZ26)
Pfam (PF00572)
Trichomonas vaginalisuL13
18R
(P)
Ribosomal protein L22, putativepolymer16418530.51UniProt (A2DM53)
Pfam (PF00237)
Trichomonas vaginalisuL22
19S
(Q)
60S ribosomal protein L18, putativepolymer18621122.51UniProt (A2D7Q5)
Pfam (PF17135)
Trichomonas vaginaliseL18
20T
(R)
60S ribosomal protein L19-3, putativepolymer17821056.81UniProt (A2D8G1)
Pfam (PF01280)
Trichomonas vaginaliseL19
21U
(S)
60S ribosomal protein L18apolymer17619854.01UniProt (A2EP03)
Pfam (PF01775)
Trichomonas vaginaliseL20
22V
(T)
Ribosomal protein L21e, putativepolymer15917910.91UniProt (A2F2S5)
Pfam (PF01157)
Trichomonas vaginaliseL21
23W
(U)
60S ribosomal protein L22-1, putativepolymer10612237.11UniProt (A2DNV5)
Pfam (PF01776)
Trichomonas vaginaliseL22
24X
(V)
60S ribosomal protein L23, putativepolymer14014840.61UniProt (A2DP51)
Pfam (PF00238)
Trichomonas vaginalisuL14
25Y
(W)
Ribosomal protein L24e, putativepolymer11313282.51UniProt (A2DJQ1)
Pfam (PF01246)
Trichomonas vaginaliseL24
26Z
(X)
Ribosomal protein L23, putativepolymer14015582.21UniProt (A2DUV8)
Pfam (PF00276)
Trichomonas vaginalisuL23
27AA
(Y)
Ribosomal protein L24, putativepolymer13815782.61UniProt (A2DKF2)
Pfam (PF16906)
Trichomonas vaginalisuL24
28BA
(Z)
Ribosomal protein L27e, putativepolymer13915946.11UniProt (A2DNC1)
Pfam (PF01777)
Trichomonas vaginaliseL27
29CA
(a)
Uncharacterized proteinpolymer15117006.81UniProt (A2DHU7)
Pfam (PF00828)
Trichomonas vaginalisuL15
30DA
(b)
60S ribosomal protein L29polymer586823.71UniProt (A2DM33)
Pfam (PF01779)
Trichomonas vaginaliseL29
31EA
(c)
60S ribosomal protein L30, putativepolymer11212316.21UniProt (A2E6Z9)
Pfam (PF01248)
Trichomonas vaginaliseL30
32FA
(d)
Ribosomal protein L31e, putativepolymer11012446.51UniProt (A2D9N8)
Pfam (PF01198)
Trichomonas vaginaliseL31
33GA
(e)
Ribosomal protein L32, putativepolymer13215249.71UniProt (A2F2J0)
Pfam (PF01655)
Trichomonas vaginaliseL32
34HA
(f)
Ribosomal protein L35Ae, putativepolymer10211668.71UniProt (A2DSF3)
Pfam (PF01247)
Trichomonas vaginaliseL33
35IA
(g)
Ribosomal protein L34e, putativepolymer11613346.61UniProt (A2FWA1)
Pfam (PF01199)
Trichomonas vaginaliseL34
36JA
(h)
Ribosomal protein L29, putativepolymer12414300.01UniProt (A2E6R2)
Pfam (PF00831)
Trichomonas vaginalisuL29
37KA
(i)
Ribosomal protein L36e, putativepolymer9110941.71UniProt (A2EXW7)
Pfam (PF01158)
Trichomonas vaginaliseL36
38LA
(j)
Ribosomal protein L37polymer819355.91UniProt (A2F8Y8)
Pfam (PF01907)
Trichomonas vaginaliseL37
39MA
(k)
Ribosomal protein L38e, putativepolymer748469.01UniProt (A2FFH9)
Pfam (PF01781)
Trichomonas vaginaliseL38
40NA
(l)
60S ribosomal protein L39, putativepolymer516297.81UniProt (A2D9N4)
Pfam (PF00832)
Trichomonas vaginaliseL39
41OA
(m)
Ubiquitin, putativepolymer13215101.51UniProt (A2DGL5)
Pfam (PF00240)
Pfam (PF01020)
Trichomonas vaginaliseL40
42PA
(o)
60S ribosomal protein L44, putativepolymer10412471.01UniProt (A2DAI6)
Pfam (PF00935)
Trichomonas vaginaliseL41
43QA
(p)
Uncharacterized proteinpolymer9210052.01UniProt (A2DEM7)
Pfam (PF01780)
Trichomonas vaginaliseL43
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains43
Total formula weight1713540.1
All*Total formula weight1713540.1
*Water molecules are not included.

246905

PDB entries from 2025-12-31

PDB statisticsPDBj update infoContact PDBjnumon