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5XSP

The catalytic domain of GdpP with 5'-pApA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Phosphodiesterase acting on cyclic dinucleotidespolymer34338131.22UniProt (A0A0U1MUE2)
Pfam (PF01368)
Pfam (PF02272)
Staphylococcus aureus
2C, D
(C, D)
DNA (5'-R(P*AP*A)-3')polymer2613.52synthetic construct
3E, F, G, H
(A, B)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
4I, J, K, L
(A, B, C, D)
waterwater18.0316Chemie (HOH)
Sequence modifications
A, B: 316 - 655 (UniProt: A0A0U1MUE2)
PDBExternal DatabaseDetails
Gly 313-expression tag
Ser 314-expression tag
Met 315-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight77489.2
Non-Polymers*Number of molecules4
Total formula weight219.8
All*Total formula weight77709.0
*Water molecules are not included.

247536

PDB entries from 2026-01-14

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