5XSP
The catalytic domain of GdpP with 5'-pApA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Phosphodiesterase acting on cyclic dinucleotides | polymer | 343 | 38131.2 | 2 | UniProt (A0A0U1MUE2) Pfam (PF01368) Pfam (PF02272) | Staphylococcus aureus | |
| 2 | C, D (C, D) | DNA (5'-R(P*AP*A)-3') | polymer | 2 | 613.5 | 2 | synthetic construct | ||
| 3 | E, F, G, H (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 4 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 316 | Chemie (HOH) |
Sequence modifications
A, B: 316 - 655 (UniProt: A0A0U1MUE2)
| PDB | External Database | Details |
|---|---|---|
| Gly 313 | - | expression tag |
| Ser 314 | - | expression tag |
| Met 315 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 77489.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 219.8 | |
| All* | Total formula weight | 77709.0 |






