5XN7
Crystal structure of the effector domain RID of Vibrio vulnificus MARTX toxin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Putative RTX-toxin | polymer | 616 | 68578.5 | 2 | UniProt (F1CLG1) Pfam (PF11647) UniProt (by SIFTS) (A0A2S3R7M0) | Vibrio vulnificus | |
| 2 | C, D (A) | 1,4-DIETHYLENE DIOXIDE | non-polymer | 88.1 | 2 | Chemie (DIO) | |||
| 3 | E (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | F, J (A, B) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) | |||
| 5 | G (A) | FORMIC ACID | non-polymer | 46.0 | 1 | Chemie (FMT) | |||
| 6 | H, I, K (A, B) | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
| 7 | L, M (A, B) | water | water | 18.0 | 89 | Chemie (HOH) |
Sequence modifications
A, B: 2283 - 2898 (UniProt: F1CLG1)
| PDB | External Database | Details |
|---|---|---|
| Arg 2361 | Gln 458 | conflict |
| Asp 2541 | Gly 638 | conflict |
| Ala 2835 | Cys 932 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 137157.0 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 815.1 | |
| All* | Total formula weight | 137972.1 |
