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5XLZ

The crystal structure of tubulin complexed with a benzylidene derivative of 9(10H)-anthracenone

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Tubulin alpha-1B chainpolymer45050041.32UniProt (P81947)
Pfam (PF00091)
Pfam (PF03953)
Bos taurus (Bovine)Detyrosinated tubulin alpha-1B chain,Alpha-tubulin ubiquitous,Tubulin K-alpha-1,Tubulin alpha-ubiquitous chain
2B, D
(B, D)
Tubulin beta-2B chainpolymer44549999.92UniProt (Q6B856)
Pfam (PF00091)
Pfam (PF03953)
Bos taurus (Bovine)
3E
(E)
Stathmin-4polymer14316844.21UniProt (P63043)
Pfam (PF00836)
Rattus norvegicus (Rat)Stathmin-like protein B3,RB3
4F
(F)
Tubulin Tyrosine ligasepolymer38444378.51UniProt (E1BQ43)Gallus gallus (Chicken)
5G, O, R
(A, C, D)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.23Chemie (GTP)
6H, K, P, T
(A, B, C, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
7I, Q
(A, C)
CALCIUM IONnon-polymer40.12Chemie (CA)
8J
(B)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
9L, N
(B)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.22Chemie (MES)
10M, S
(B, D)
10-[(4-methoxy-3-oxidanyl-phenyl)methylidene]anthracen-9-onenon-polymer328.42Chemie (89U)
11U
(F)
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTERnon-polymer505.21Chemie (ACP)
12AA, V, W, X, Y...
(F, A, B, C, D...)
waterwater18.0779Chemie (HOH)
Sequence modifications
E: 5 - 145 (UniProt: P63043)
PDBExternal DatabaseDetails
Met 3-expression tag
Ala 4-expression tag
F: 1 - 378 (UniProt: E1BQ43)
PDBExternal DatabaseDetails
His 379-expression tag
His 380-expression tag
His 381-expression tag
His 382-expression tag
His 383-expression tag
His 384-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight261305.0
Non-Polymers*Number of molecules15
Total formula weight3742.5
All*Total formula weight265047.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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