Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XLG

Crystal structure of anaerobically purified and aerobically crystallized D. vulgaris Miyazaki F [NiFe]-hydrogenase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(S)
Periplasmic [NiFe] hydrogenase small subunitpolymer26728789.71UniProt (P21853)
Pfam (PF01058)
Pfam (PF14720)
Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)NiFe hydrogenlyase small chain
2B
(L)
Periplasmic [NiFe] hydrogenase large subunitpolymer55260978.51UniProt (P21852)
Pfam (PF00374)
Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)NiFe hydrogenlyase large chain
3C, D
(S)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
4E
(S)
FE3-S4 CLUSTERnon-polymer295.81Chemie (F3S)
5F
(S)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.21Chemie (MPD)
6G
(S)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
7H
(L)
NI-FE OXIDIZED ACTIVE CENTERnon-polymer210.61Chemie (NFV)
8I
(L)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
9J, K
(S, L)
waterwater18.0824Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight89768.2
Non-Polymers*Number of molecules7
Total formula weight1474.3
All*Total formula weight91242.5
*Water molecules are not included.

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon