5XLG
Crystal structure of anaerobically purified and aerobically crystallized D. vulgaris Miyazaki F [NiFe]-hydrogenase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (S) | Periplasmic [NiFe] hydrogenase small subunit | polymer | 267 | 28789.7 | 1 | UniProt (P21853) Pfam (PF01058) Pfam (PF14720) | Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) | NiFe hydrogenlyase small chain |
| 2 | B (L) | Periplasmic [NiFe] hydrogenase large subunit | polymer | 552 | 60978.5 | 1 | UniProt (P21852) Pfam (PF00374) | Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) | NiFe hydrogenlyase large chain |
| 3 | C, D (S) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 2 | Chemie (SF4) | |||
| 4 | E (S) | FE3-S4 CLUSTER | non-polymer | 295.8 | 1 | Chemie (F3S) | |||
| 5 | F (S) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 6 | G (S) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
| 7 | H (L) | NI-FE OXIDIZED ACTIVE CENTER | non-polymer | 210.6 | 1 | Chemie (NFV) | |||
| 8 | I (L) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 9 | J, K (S, L) | water | water | 18.0 | 824 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 89768.2 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1474.3 | |
| All* | Total formula weight | 91242.5 |
