5XJE
Crystal structure of fucosylated IgG1 Fc complexed with bis-glycosylated soluble form of Fc gamma receptor IIIa
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Immunoglobulin gamma-1 heavy chain | polymer | 223 | 25097.4 | 2 | UniProt (P0DOX5) Pfam (PF07654) In PDB | Homo sapiens (Human) | Immunoglobulin gamma-1 heavy chain NIE |
| 2 | C | Low affinity immunoglobulin gamma Fc region receptor III-A | polymer | 179 | 20641.0 | 1 | UniProt (P08637) Pfam (PF13895) In PDB | Homo sapiens (Human) | CD16a antigen,Fc-gamma RIII-alpha,FcRIIIa,FcR-10,IgG Fc receptor III-2 |
| 3 | D, E | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1625.5 | 2 | In PDB GlyTouCan (G27919IH) | |||
| 4 | F | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
| 5 | G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 6 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 7 | water | water | 18.0 | 109 | Chemie (HOH) |
Sequence modifications
C: 3 - 175 (UniProt: P08637)
| PDB | External Database | Details |
|---|---|---|
| Gln 38 | Asn 56 | engineered mutation |
| Gln 74 | Asn 92 | engineered mutation |
| Val 158 | Phe 176 | engineered mutation |
| Gln 169 | Asn 187 | engineered mutation |
| His 176 | - | expression tag |
| His 177 | - | expression tag |
| His 178 | - | expression tag |
| His 179 | - | expression tag |
| His 180 | - | expression tag |
| His 181 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 70835.9 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 4204.9 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 35.5 | |
| All* | Total formula weight | 75076.2 |
