5X30
Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant with L-homocysteine intermediates.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C | L-methionine gamma-lyase | polymer | 398 | 42936.7 | 2 | UniProt (P13254) Pfam (PF01053) In PDB | Pseudomonas putida | MGL,Homocysteine desulfhydrase,L-methioninase |
2 | B, D | L-methionine gamma-lyase | polymer | 398 | 42708.6 | 2 | UniProt (P13254) Pfam (PF01053) In PDB | Pseudomonas putida | MGL,Homocysteine desulfhydrase,L-methioninase |
3 | A, C | 2-AMINO-4-MERCAPTO-BUTYRIC ACID | non-polymer | 135.2 | 2 | Chemie (HCS) | |||
4 | B | (2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid | non-polymer | 330.2 | 1 | Chemie (4LM) | |||
5 | B | HYDROSULFURIC ACID | non-polymer | 34.1 | 1 | Chemie (H2S) | |||
6 | D | (2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-sulfanyl-butanoic acid | non-polymer | 366.3 | 1 | Chemie (7XF) | |||
7 | water | water | 18.0 | 1021 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 398 (UniProt: P13254)
B, D: 1 - 398 (UniProt: P13254)
PDB | External Database | Details |
---|---|---|
His 116 | Cys 116 | engineered mutation |
PDB | External Database | Details |
---|---|---|
His 116 | Cys 116 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 171290.7 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 1001.0 | |
All* | Total formula weight | 172291.7 |