5WS3
Crystal structures of human orexin 2 receptor bound to the selective antagonist EMPA determined by serial femtosecond crystallography at SACLA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Orexin receptor type 2,GlgA glycogen synthase,Orexin receptor type 2 | polymer | 560 | 64204.9 | 1 | UniProt (O43614) UniProt (Q9V2J8) Pfam (PF00001) Pfam (PF13692) | Homo sapiens (Human) | Ox2R,Hypocretin receptor type 2,Glycogen synthase |
2 | B (A) | N-ethyl-2-[(6-methoxypyridin-3-yl)-(2-methylphenyl)sulfonyl-amino]-N-(pyridin-3-ylmethyl)ethanamide | non-polymer | 454.5 | 1 | Chemie (7MA) | |||
3 | C, D, E, F (A) | OLEIC ACID | non-polymer | 282.5 | 4 | Chemie (OLA) | |||
4 | G, H (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 2 | Chemie (1PE) | |||
5 | I (A) | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
A: 3 - 254 (UniProt: O43614)
A: 1001 - 1196 (UniProt: Q9V2J8)
A: 294 - 388 (UniProt: O43614)
PDB | External Database | Details |
---|---|---|
Asp -6 | - | expression tag |
Tyr -5 | - | expression tag |
Lys -4 | - | expression tag |
Asp -3 | - | expression tag |
Asp -2 | - | expression tag |
Asp -1 | - | expression tag |
Asp 0 | - | expression tag |
Ala 1 | - | expression tag |
Met 2 | - | expression tag |
A: 294 - 388 (UniProt: O43614)
PDB | External Database | Details |
---|---|---|
Val 308 | Ile 308 | variant |
His 389 | - | expression tag |
His 390 | - | expression tag |
His 391 | - | expression tag |
His 392 | - | expression tag |
His 393 | - | expression tag |
His 394 | - | expression tag |
His 395 | - | expression tag |
His 396 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 64204.9 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 2060.9 | |
All* | Total formula weight | 66265.8 |