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5WDJ

CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH COMPOUND-6 AKA 7-(BENZYLOXY)-1H-[1,2, 3]TRIAZOLO[4,5-D]PYRIMIDIN-5-AMINE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, D)
Myeloperoxidasepolymer10511974.42UniProt (P05164)Homo sapiens (Human)MPO
2B, D
(B, E)
Myeloperoxidasepolymer46753305.32UniProt (P05164)
Pfam (PF03098)
Homo sapiens (Human)MPO
3E
(C)
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched545.51In PDB
GlyTouCan (G29301NP)
4F
(F)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
5G, Y
(A, E)
7-(benzyloxy)-1H-[1,2,3]triazolo[4,5-d]pyrimidin-5-aminenon-polymer242.22Chemie (AEY)
6H, Q, S, Z
(A, B, D, E)
CHLORIDE IONnon-polymer35.54Chemie (CL)
7I, R
(A, D)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
8J, T
(A, D)
CALCIUM IONnon-polymer40.12Chemie (CA)
9K, M, N, W, X
(B, E)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.25Chemie (NAG)
10L, V
(B, E)
alpha-L-fucopyranosenon-polymer164.22Chemie (FUC)
11O, P, U
(B, E)
alpha-D-mannopyranosenon-polymer180.23Chemie (MAN)
12AA, BA, CA, DA
(A, B, D, E)
waterwater18.0522Chemie (HOH)
Sequence modifications
B, E: 113 - 578 (UniProt: P05164)
PDBExternal DatabaseDetails
Ala 112-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight130559.4
BranchedNumber of molecules2
Total formula weight1132.0
Non-Polymers*Number of molecules20
Total formula weight3914.2
All*Total formula weight135605.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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