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5W1F

Crystal structure of Ni(II)- and Ca(II)-bound human calprotectin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, G, EProtein S100-A8polymer9310837.54UniProt (P05109)
Pfam (PF01023)
In PDB
Homo sapiens (Human)Calgranulin-A,Calprotectin L1L subunit,Cystic fibrosis antigen,CFAG,Leukocyte L1 complex light chain,Migration inhibitory factor-related protein 8,p8,S100 calcium-binding protein A8,Urinary stone protein band A
2B, D, H, FProtein S100-A9polymer11413248.04UniProt (P06702)
Pfam (PF01023)
In PDB
Homo sapiens (Human)Calgranulin-B,Calprotectin L1H subunit,Leukocyte L1 complex heavy chain,Migration inhibitory factor-related protein 14,p14,S100 calcium-binding protein A9
3A, B, C, G, H...SODIUM IONnon-polymer23.06Chemie (NA)
4E, F, A, B, C...CALCIUM IONnon-polymer40.110Chemie (CA)
5F, B, C, D, H...NICKEL (II) IONnon-polymer58.76Chemie (NI)
6waterwater18.0148Chemie (HOH)
Sequence modifications
A, C, G, E: 1 - 93 (UniProt: P05109)
PDBExternal DatabaseDetails
Ser 42Cys 42engineered mutation
B, D, H, F: 1 - 114 (UniProt: P06702)
PDBExternal DatabaseDetails
Ser 3Cys 3engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight96341.7
Non-Polymers*Number of molecules22
Total formula weight890.9
All*Total formula weight97232.5
*Water molecules are not included.

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PDB entries from 2024-05-01

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